RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MAGEB16A2A368 324 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 CTAGE15A4D2H0 777 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 OR5H15A6NDH6 313 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 ZNF839A8K0R7 811 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 PRSS44E7EML9 344 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 H0YIG0 161 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 PRAMEF2O60811 474 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 PHF2O75151 1096 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 CDC123O75794 336 aaPredicted RBP5.85□□□□□ -1.47
NUP88-212ENST00000576708 RASAL1O95294 804 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 AHSGP02765 367 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 CDH1P12830 882 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 ENO3P13929 434 aaPredicted RBP5.85□□□□□ -1.47
NUP88-212ENST00000576708 FAHP16930 419 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 XCR1P46094 333 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 PER3P56645 1201 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 OLR1P78380 273 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 IRF9Q00978 393 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 RELAQ04206 551 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 NAE1Q13564 534 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 FAM53BQ14153 422 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 CYP1B1Q16678 543 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 NDUFA9Q16795 377 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 PHKG1Q16816 387 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 BTBD16Q32M84 506 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 RNASEH2BQ5TBB1 312 aaKnown RBP5.85□□□□□ -1.47
NUP88-212ENST00000576708 ABHD17BQ5VST6 288 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 AGTRAPQ6RW13 159 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 CPEB2Q7Z5Q1 589 aaKnown RBP5.85□□□□□ -1.47
NUP88-212ENST00000576708 ANKRD37Q7Z713 158 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 ASPGQ86U10 573 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 CTAGE6Q86UF2 777 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 SLC26A11Q86WA9 606 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 THNSL2Q86YJ6 484 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 CRLF3Q8IUI8 442 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 BEST3Q8N1M1 668 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 ZNF740Q8NDX6 193 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 METTL21AQ8WXB1 218 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 KCNJ9Q92806 393 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 TSLPQ969D9 159 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 PYCR2Q96C36 320 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 TM4SF19Q96DZ7 209 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 LINGO1Q96FE5 620 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 PWWP2AQ96N64 755 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 SIGLEC12Q96PQ1 595 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 NPAS2Q99743 824 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 EBNA1BP2Q99848 306 aaKnown RBP5.85□□□□□ -1.47
NUP88-212ENST00000576708 TUBB6Q9BUF5 446 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 SPNS1Q9H2V7 528 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 PLAC1Q9HBJ0 212 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 XAB2Q9HCS7 855 aaKnown RBP5.85□□□□□ -1.47
NUP88-212ENST00000576708 CCDC177Q9NQR7 707 aaPredicted RBP5.85□□□□□ -1.47
NUP88-212ENST00000576708 TMEM184CQ9NVA4 438 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 UTP6Q9NYH9 597 aaKnown RBP5.85□□□□□ -1.47
NUP88-212ENST00000576708 COPG2Q9UBF2 871 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 TRMT6Q9UJA5 497 aaKnown RBP5.85□□□□□ -1.47
NUP88-212ENST00000576708 IKZF3Q9UKT9 509 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 NAALAD2Q9Y3Q0 740 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 CELSR2Q9HCU4 2923 aa5.85□□□□□ -1.47
NUP88-212ENST00000576708 CACNA1DQ01668 2161 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 DOPEY1Q5JWR5 2465 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 RP1L1Q8IWN7 2480 aaPredicted RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 KCNE1BA0A087WTH5 132 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 A0A1B0GUH1 482 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 FAM227AF5H4B4 570 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 CCL21O00585 134 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 TXNDC9O14530 226 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 NSA2O95478 260 aaKnown RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 TSPAN15O95858 294 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 TSPAN12O95859 305 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 PLA2G1BP04054 148 aaKnown RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 SERPIND1P05546 499 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 NPPBP16860 134 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 POU3F2P20265 443 aaPredicted RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 FDXRP22570 491 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 TNFRSF8P28908 595 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 HNF4AP41235 474 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 LINC00310P59036 64 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 RPS15AP62244 130 aaKnown RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 RHAGQ02094 409 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 TUBA3CQ13748 450 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 CRYMQ14894 314 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 C3AR1Q16581 482 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 SFT2D3Q587I9 215 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 ZNF766Q5HY98 468 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 ACER2Q5QJU3 275 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 CATSPEREQ5SY80 951 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 SPINK14Q6IE38 97 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 CAPN13Q6MZZ7 669 aaPredicted RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 TUBA3EQ6PEY2 450 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 PAPD4Q6PIY7 484 aaKnown RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 TMEM207Q6UWW9 146 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 NCCRP1Q6ZVX7 275 aaPredicted RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 C17orf64Q86WR6 236 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 TICAM1Q8IUC6 712 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 SLC35F6Q8N357 371 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 KIF2BQ8N4N8 673 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 MFSD9Q8NBP5 474 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 CAMKVQ8NCB2 501 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 MCOLN3Q8TDD5 553 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms