RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 C8orf89P0DMQ9 161 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 ACPPP15309 386 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 TLX1P31314 330 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-213ENST00000573577 LIM2P55344 173 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 KLRB1Q12918 225 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 AIMP2Q13155 320 aaKnown RBP12.74□□□□□ -0.37
RPAIN-213ENST00000573577 RUNX2Q13950 521 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 IMPG1Q17R60 797 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 TCHHL1Q5QJ38 904 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-213ENST00000573577 ZNF793Q6ZN11 406 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 TRIM42Q8IWZ5 723 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 CLYBLQ8N0X4 340 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 GALNT16Q8N428 558 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 C7orf57Q8NEG2 295 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 OR11G2Q8NGC1 345 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 MGARPQ8TDB4 240 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 MESP1Q9BRJ9 268 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 NUDT9Q9BW91 350 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 DDX31Q9H8H2 851 aaKnown RBP12.74□□□□□ -0.37
RPAIN-213ENST00000573577 ATP13A2Q9NQ11 1180 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 LYARQ9NX58 379 aaKnown RBP12.74□□□□□ -0.37
RPAIN-213ENST00000573577 PHF11Q9UIL8 331 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 ANAPC2Q9UJX6 822 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 MMACHCQ9Y4U1 282 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 PCDHGB7Q9Y5F8 929 aa12.74□□□□□ -0.37
RPAIN-213ENST00000573577 CCDC88CQ9P219 2028 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 PRMT3O60678 531 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 B4GALT2O60909 372 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 JRKO75564 520 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 CDC123O75794 336 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-213ENST00000573577 SASH3O75995 380 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 HSPA4LO95757 839 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 CHRNGP07510 517 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 BSGP35613 385 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 BUD31P41223 144 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-213ENST00000573577 FOXA1P55317 472 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 SOX8P57073 446 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 STX3Q13277 289 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 SLAMF1Q13291 335 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 RAPSNQ13702 412 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 MYBPC3Q14896 1274 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 ABRAXAS2Q15018 415 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 SPIN4Q56A73 249 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 TTMPQ5BVD1 217 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 SH2D4BQ5SQS7 431 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 CLEC6AQ6EIG7 209 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 ATG14Q6ZNE5 492 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 QSOX2Q6ZRP7 698 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 RNF165Q6ZSG1 346 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 ZNF595Q8IYB9 648 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 METTL4Q8N3J2 472 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 PLPP5Q8NEB5 264 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 RAB3IL1Q8TBN0 382 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 MARVELD3Q96A59 401 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 C8orf44Q96CB5 159 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 HBEGFQ99075 208 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 SMAD5Q99717 465 aaKnown RBP12.73□□□□□ -0.37
RPAIN-213ENST00000573577 MRPL1Q9BYD6 325 aaKnown RBP12.73□□□□□ -0.37
RPAIN-213ENST00000573577 RBCK1Q9BYM8 510 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 PFDN4Q9NQP4 134 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 LANCL2Q9NS86 450 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 FIS1Q9Y3D6 152 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 ZNF451Q9Y4E5 1061 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 TRAF6Q9Y4K3 522 aa12.73□□□□□ -0.37
RPAIN-213ENST00000573577 FASNP49327 2511 aaKnown RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 A0A0A6YYD5 115 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 A0A1W2PQ72 361 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 SLC28A1O00337 649 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 KLHL41O60662 606 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 DNAJB6O75190 326 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 GUCY1B2O75343 617 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 RSL1D1O76021 490 aaKnown RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 HPP00738 406 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 ALPPP05187 535 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 HOXB1P14653 301 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 BGNP21810 368 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 CPN2P22792 545 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 ITGA3P26006 1051 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 CASRP41180 1078 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 SLC1A6P48664 564 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 HTR6P50406 440 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 EFNA3P52797 238 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 HSD17B7P56937 341 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 WDR4P57081 412 aaKnown RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 ABCE1P61221 599 aaKnown RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 RHAGQ02094 409 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 ACSM2AQ08AH3 577 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 NSDHLQ15738 373 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 HSP90B2PQ58FF3 399 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 CCNYL2Q5T2Q4 361 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 VWA5B1Q5TIE3 1220 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 KANK2Q63ZY3 851 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 ACSM2BQ68CK6 577 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 FAAH2Q6GMR7 532 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 TMEM205Q6UW68 189 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 COMMD6Q7Z4G1 85 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 TRIM46Q7Z4K8 759 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 GPR180Q86V85 440 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms