RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 SLBPQ14493 270 aaKnown RBP eCLIP13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 UNC50Q53HI1 259 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 ZNF678Q5SXM1 525 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 HHATQ5VTY9 493 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 LIPMQ5VYY2 423 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 TMEM214Q6NUQ4 689 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 TUBA3EQ6PEY2 450 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 SLCO4C1Q6ZQN7 724 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 GDF7Q7Z4P5 450 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 ANKRD37Q7Z713 158 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 C10orf107Q8IVU9 208 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 MDS2Q8NDY4 140 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 OR4K1Q8NGD4 311 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 THAP11Q96EK4 314 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 PTCD3Q96EY7 689 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 SIGLEC12Q96PQ1 595 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 TMEM237Q96Q45 408 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 PAIP2Q9BPZ3 127 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 EFCAB11Q9BUY7 163 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 EHD1Q9H4M9 534 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 NOL11Q9H8H0 719 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 KCNK13Q9HB14 408 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 OXSMQ9NWU1 459 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 NKIRAS1Q9NYS0 192 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 PCTPQ9UKL6 214 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 PCDHGB6Q9Y5F9 930 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 TRBC2A0A5B9 178 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 TMEM120BA0PK00 339 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 HMGB1P1B2RPK0 211 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 TRIM13O60858 407 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 SERPIND1P05546 499 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 SNRPB2P08579 225 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 ST13P50502 369 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 CASP6P55212 293 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 DNAJB13P59910 316 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 ADORA2A-AS1P86434 159 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 REEP5Q00765 189 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 CLCQ05315 142 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 DOC2AQ14183 400 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 PCLAFQ15004 111 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 C3AR1Q16581 482 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 HSP90B2PQ58FF3 399 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 XKRXQ6PP77 449 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 PDSS2Q86YH6 399 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 CRLF3Q8IUI8 442 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 NUDCD3Q8IVD9 361 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 KCT2Q8NC54 265 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 CAMKVQ8NCB2 501 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 PPP1R14CQ8TAE6 165 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 ZCCHC10Q8TBK6 192 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 TRPC4APQ8TEL6 797 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 UBE2E3Q969T4 207 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 TM4SF19Q96DZ7 209 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 L3HYPDHQ96EM0 354 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 NSUN5Q96P11 429 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 NPAS2Q99743 824 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 SH3GL2Q99962 352 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 C1QTNF3Q9BXJ4 246 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 HES7Q9BYE0 225 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 ANKHQ9HCJ1 492 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 ZNF446Q9NWS9 450 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 ANKRD10Q9NXR5 420 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 TINAGQ9UJW2 476 aa13.89□□□□□ -0.19
NPLOC4-207ENST00000572346 WDR91A4D1P6 747 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 DYNC1I1O14576 645 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 LCMT2O60294 686 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 RDH16O75452 317 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 CLDN9O95484 217 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 OTCP00480 354 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 TSPAN8P19075 237 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 ALDH3A1P30838 453 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 HPDP32754 393 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 CD96P40200 585 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 HNF4AP41235 474 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 SERPINB4P48594 390 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 NAGLUP54802 743 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 TBCCQ15814 346 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 EXT1Q16394 746 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 MEP1AQ16819 746 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 TTMPQ5BVD1 217 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 LIPJQ5W064 366 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 TMIGD1Q6UXZ0 262 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 RPS27LQ71UM5 84 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 MILR1Q7Z6M3 343 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 MFSD9Q8NBP5 474 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 ZNF740Q8NDX6 193 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 M1APQ8TC57 530 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 MGARPQ8TDB4 240 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 ZNF483Q8TF39 744 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 THAP3Q8WTV1 239 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 CCT6BQ92526 530 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 GPR137Q96N19 417 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 MECRQ9BV79 373 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 PITHD1Q9GZP4 211 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 SPNS1Q9H2V7 528 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 MMP25Q9NPA2 562 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 KLHL1Q9NR64 748 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 STK38LQ9Y2H1 464 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 ZNF835Q9Y2P0 537 aa13.88□□□□□ -0.19
NPLOC4-207ENST00000572346 CACNA1CQ13936 2221 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms