RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 RASGRP3Q8IV61 690 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 SCLYQ96I15 445 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 ST6GAL2Q96JF0 529 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 C3orf14Q9HBI5 128 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 CENPXA8MT69 81 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 A8MVJ9 347 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 MPZL2O60487 215 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 POP4O95707 220 aaKnown RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 IFNA14P01570 189 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 PSMA1P25786 263 aaKnown RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 SLAMF1Q13291 335 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 ZNF630Q2M218 657 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 SPOUT1Q5T280 376 aaKnown RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 ZDHHC20Q5W0Z9 365 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 METTL3Q86U44 580 aaKnown RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 CRIPAKQ8N1N5 446 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 UBE2J2Q8N2K1 259 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 CELF5Q8N6W0 485 aaKnown RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 OR56A3Q8NH54 315 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 C16orf78Q8WTQ4 265 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 PHOX2BQ99453 314 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 SORBS1Q9BX66 1292 aaKnown RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 MAPRE3Q9UPY8 281 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 TRAPPC4Q9Y296 219 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 A0A1W2PQ09 198 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 A0A1W2PRB8 838 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 ZNF197O14709 1029 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 NPC1O15118 1278 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 GUCY1B2O75343 617 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 IL7P13232 177 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 RORCP51449 518 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 ATN1P54259 1190 aaPredicted RBP16.66■□□□□ 0.26
SCARF1-205ENST00000571272 PCBP3P57721 371 aaKnown RBP16.66■□□□□ 0.26
SCARF1-205ENST00000571272 TBRG1Q3YBR2 411 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 LIPKQ5VXJ0 399 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 KRT73Q86Y46 540 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 LAS2Q8IYD9 372 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 GPR65Q8IYL9 337 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 RASGEF1AQ8N9B8 481 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 POLR2J2Q9GZM3 115 aaKnown RBP16.66■□□□□ 0.26
SCARF1-205ENST00000571272 NPAP1Q9NZP6 1156 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 ANGPT4Q9Y264 503 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 SNX11Q9Y5W9 270 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 GOLGA4Q13439 2230 aaKnown RBP16.66■□□□□ 0.26
SCARF1-205ENST00000571272 SMIM30A4D0T7 59 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 FAM172BPA6NC97 362 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 NRG2O14511 850 aaPredicted RBP16.66■□□□□ 0.26
SCARF1-205ENST00000571272 HOXA2O43364 376 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 CYP17A1P05093 508 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 CRYBB2P43320 205 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 SEC23BQ15437 767 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 TPGS2Q68CL5 300 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 ZNF770Q6IQ21 691 aaPredicted RBP16.66■□□□□ 0.26
SCARF1-205ENST00000571272 TNFAIP8L2Q6P589 184 aaPredicted RBP16.66■□□□□ 0.26
SCARF1-205ENST00000571272 ZNF480Q8WV37 535 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 TMEM203Q969S6 136 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 RC3H2Q9HBD1 1191 aaKnown RBP16.66■□□□□ 0.26
SCARF1-205ENST00000571272 SLC25A19Q9HC21 320 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 PLSCR3Q9NRY6 295 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 HS3ST2Q9Y278 367 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 INSL5Q9Y5Q6 135 aa16.66■□□□□ 0.26
SCARF1-205ENST00000571272 OR10H3O60404 316 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 URODP06132 367 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 FHP07954 510 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 HBQ1P09105 142 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 ARAFP10398 606 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 CSTF2P33240 577 aaKnown RBP eCLIP16.65■□□□□ 0.26
SCARF1-205ENST00000571272 TBPL1P62380 186 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 RUNX1T1Q06455 604 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 UAP1L1Q3KQV9 507 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-205ENST00000571272 GAREM2Q75VX8 874 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 ZNF740Q8NDX6 193 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 KLHL6Q8WZ60 621 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 DEPDC7Q96QD5 511 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 SPNS1Q9H2V7 528 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 ASAH2Q9NR71 780 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 MRPL17Q9NRX2 175 aaKnown RBP16.65■□□□□ 0.26
SCARF1-205ENST00000571272 TBC1D14Q9P2M4 693 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 ENOPH1Q9UHY7 261 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 KLHL20Q9Y2M5 609 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 LSM2Q9Y333 95 aaKnown RBP16.65■□□□□ 0.26
SCARF1-205ENST00000571272 MEIOCA2RUB1 952 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 UGT2B17O75795 530 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 OLFM2O95897 454 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 CXCR2P25025 360 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 RHAGQ02094 409 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 GDPD4Q6W3E5 623 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 RBM45Q8IUH3 476 aaKnown RBP16.65■□□□□ 0.26
SCARF1-205ENST00000571272 TCEANCQ8N8B7 351 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 ASCC1Q8N9N2 400 aaKnown RBP16.65■□□□□ 0.26
SCARF1-205ENST00000571272 CXorf40BQ96DE9 158 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 TMEM80Q96HE8 168 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 BEX2Q9BXY8 128 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 SLC6A16Q9GZN6 736 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 PCDHGB2Q9Y5G2 931 aa16.65■□□□□ 0.26
SCARF1-205ENST00000571272 PLD2O14939 933 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 KLHL18O94889 574 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 CDRT1O95170 752 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms