RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PKNOX2Q96KN3 472 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 ART5Q96L15 291 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 MARK4Q96L34 752 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 IL17FQ96PD4 163 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 TSGA13Q96PP4 275 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 ZNF747Q9BV97 191 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 FAM129AQ9BZQ8 928 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.36□□□□□ -1.39
CHD3-213ENST00000571249 KCMF1Q9P0J7 381 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 ANAPC7Q9UJX3 599 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 GDF2Q9UK05 429 aaPredicted RBP6.36□□□□□ -1.39
CHD3-213ENST00000571249 ADAM30Q9UKF2 790 aa6.36□□□□□ -1.39
CHD3-213ENST00000571249 PRR14LQ5THK1 2151 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 TRGV5A0A0B4J1U4 118 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 GOLGA6L10A0A0M3HER8 536 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 OVOL3O00110 214 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 KCNK1O00180 336 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 HCN1O60741 890 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 DNAJA2O60884 412 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 TMCC2O75069 709 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 PHF2O75151 1096 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 ITGA10O75578 1167 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 CYC1P08574 325 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 ATP1B2P14415 290 aaPredicted RBP6.35□□□□□ -1.39
CHD3-213ENST00000571249 ZFP36P26651 326 aaKnown RBP6.35□□□□□ -1.39
CHD3-213ENST00000571249 IL1R2P27930 398 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 ECHS1P30084 290 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 OPRM1P35372 400 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 MC3RP41968 323 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 MARCKSL1P49006 195 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 FNTAP49354 379 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 OR4D2P58180 307 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 GABPB1Q06547 395 aaPredicted RBP6.35□□□□□ -1.39
CHD3-213ENST00000571249 ZBTB17Q13105 803 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 KLF1Q13351 362 aaPredicted RBP6.35□□□□□ -1.39
CHD3-213ENST00000571249 PTK6Q13882 451 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 PIGHQ14442 188 aaPredicted RBP6.35□□□□□ -1.39
CHD3-213ENST00000571249 GBX1Q14549 363 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 NSDHLQ15738 373 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 SEL1L2Q5TEA6 688 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 DUPD1Q68J44 220 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 SHISA2Q6UWI4 295 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 C22orf34Q6ZV56 151 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 RNF44Q7L0R7 432 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 LACC1Q8IV20 430 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 ZNF441Q8N8Z8 693 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 PRELID2Q8N945 189 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 GPATCH11Q8N954 259 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 CCNYQ8ND76 341 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 PSD4Q8NDX1 1056 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 SPATA22Q8NHS9 363 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 IMP4Q96G21 291 aaKnown RBP6.35□□□□□ -1.39
CHD3-213ENST00000571249 MIPEPQ99797 713 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 CEP41Q9BYV8 373 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 DEFB126Q9BYW3 111 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 DRC3Q9H069 523 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 DDX47Q9H0S4 455 aaKnown RBP6.35□□□□□ -1.39
CHD3-213ENST00000571249 TRABDQ9H4I3 376 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 FAM96AQ9H5X1 160 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 IL1RL2Q9HB29 575 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 PCDH18Q9HCL0 1135 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 MED4Q9NPJ6 270 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 FAM114A2Q9NRY5 505 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 ZNF226Q9NYT6 803 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 ZNF69Q9UC07 566 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 ERVK-11Q9UQG0 969 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.35□□□□□ -1.39
CHD3-213ENST00000571249 PKP3Q9Y446 797 aa6.35□□□□□ -1.39
CHD3-213ENST00000571249 AHRRA9YTQ3 701 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 STX7O15400 261 aaKnown RBP6.34□□□□□ -1.39
CHD3-213ENST00000571249 ERN1O75460 977 aaKnown RBP6.34□□□□□ -1.39
CHD3-213ENST00000571249 SRP72O76094 671 aaKnown RBP6.34□□□□□ -1.39
CHD3-213ENST00000571249 PRKD3O94806 890 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 PF4V1P10720 104 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 CRYGSP22914 178 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 DPP4P27487 766 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 COILP38432 576 aaPredicted RBP6.34□□□□□ -1.39
CHD3-213ENST00000571249 XCR1P46094 333 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 AVPR1BP47901 424 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 TAS2R40P59535 323 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 RPS4XP62701 263 aaKnown RBP6.34□□□□□ -1.39
CHD3-213ENST00000571249 SNRPNP63162 240 aaKnown RBP6.34□□□□□ -1.39
CHD3-213ENST00000571249 GUCY2DQ02846 1103 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 LOXL1Q08397 574 aaPredicted RBP6.34□□□□□ -1.39
CHD3-213ENST00000571249 FAM27E3Q08E93 113 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 FOXF2Q12947 444 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 MMRN1Q13201 1228 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 ABRAXAS2Q15018 415 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 DRICH1Q6PGQ1 229 aaPredicted RBP6.34□□□□□ -1.39
CHD3-213ENST00000571249 SYDE1Q6ZW31 735 aaPredicted RBP6.34□□□□□ -1.39
CHD3-213ENST00000571249 GLT6D1Q7Z4J2 308 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 CPNE8Q86YQ8 564 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 KLHL7Q8IXQ5 586 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 RCOR2Q8IZ40 523 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 SLC25A41Q8N5S1 370 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 BVESQ8NE79 360 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 OR9A4Q8NGU2 314 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 OR51Q1Q8NH59 317 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 BLOC1S5Q8TDH9 187 aa6.34□□□□□ -1.39
CHD3-213ENST00000571249 ZFAND2BQ8WV99 257 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms