RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 UNC50Q53HI1 259 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 PRR30Q53SZ7 412 aaPredicted RBP11.86□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF678Q5SXM1 525 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 FRG2Q64ET8 278 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 ATCAYQ86WG3 371 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 SLC22A9Q8IVM8 553 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 ZCCHC7Q8N3Z6 543 aaKnown RBP11.86□□□□□ -0.51
TVP23B-204ENST00000571018 CISD2Q8N5K1 135 aaKnown RBP11.86□□□□□ -0.51
TVP23B-204ENST00000571018 MYRIPQ8NFW9 859 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 EPS8L3Q8TE67 593 aaKnown RBP11.86□□□□□ -0.51
TVP23B-204ENST00000571018 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
TVP23B-204ENST00000571018 CNDP1Q96KN2 507 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 FRG2BQ96QU4 278 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 SORBS1Q9BX66 1292 aaKnown RBP11.86□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF717Q9BY31 904 aaPredicted RBP11.86□□□□□ -0.51
TVP23B-204ENST00000571018 MS4A12Q9NXJ0 267 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 PLA2G3Q9NZ20 509 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 EMCNQ9ULC0 261 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 SPACA6W5XKT8 324 aa11.86□□□□□ -0.51
TVP23B-204ENST00000571018 SMIM23A6NLE4 172 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 A8MUA0 341 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 VPS4BO75351 444 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 SUPT7LO94864 414 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 SEMA3DO95025 777 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 ETHE1O95571 254 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 WDPCPO95876 746 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 NUDT17P0C025 328 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 TSPAN8P19075 237 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 CPN2P22792 545 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 CRHR1P34998 444 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 BSGP35613 385 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 CCT5P48643 541 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 TNFSF10P50591 281 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 PRKAA2P54646 552 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 TAS2R50P59544 299 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 MEP1AQ16819 746 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 ACER2Q5QJU3 275 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 TTC19Q6DKK2 380 aaPredicted RBP11.85□□□□□ -0.51
TVP23B-204ENST00000571018 RPUSD3Q6P087 351 aaKnown RBP11.85□□□□□ -0.51
TVP23B-204ENST00000571018 LETMD1Q6P1Q0 360 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 EMBQ6PCB8 327 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 CRLF3Q8IUI8 442 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 LGI4Q8N135 537 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 SLC5A8Q8N695 610 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 GALNT11Q8NCW6 608 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 TRPC4APQ8TEL6 797 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 MTFMTQ96DP5 389 aaKnown RBP11.85□□□□□ -0.51
TVP23B-204ENST00000571018 L3HYPDHQ96EM0 354 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 TMEM237Q96Q45 408 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 SERPINI1Q99574 410 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 BARD1Q99728 777 aaKnown RBP11.85□□□□□ -0.51
TVP23B-204ENST00000571018 NPAS2Q99743 824 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 DDX31Q9H8H2 851 aaKnown RBP11.85□□□□□ -0.51
TVP23B-204ENST00000571018 ASF1BQ9NVP2 202 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 TRPS1Q9UHF7 1281 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF225Q9UK10 706 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 FBXW2Q9UKT8 454 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 GRID1Q9ULK0 1009 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 VPS4AQ9UN37 437 aa11.85□□□□□ -0.51
TVP23B-204ENST00000571018 PPIEQ9UNP9 301 aaKnown RBP11.85□□□□□ -0.51
TVP23B-204ENST00000571018 COPG1Q9Y678 874 aaKnown RBP11.85□□□□□ -0.51
TVP23B-204ENST00000571018 A0A0A6YYD5 115 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 TRAV17A0A0B4J275 112 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 OR5H15A6NDH6 313 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 MYO1DO94832 1006 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 OR4F21O95013 312 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 PROCP04070 461 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 PPP2R1BP30154 601 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 GPR143P51810 404 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 IFT88Q13099 833 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 SERTAD2Q14140 314 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 ELAVL1Q15717 326 aaKnown RBP11.84□□□□□ -0.51
TVP23B-204ENST00000571018 ERCC6LQ2NKX8 1250 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 FCRLBQ6BAA4 426 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 MRM1Q6IN84 353 aaKnown RBP11.84□□□□□ -0.51
TVP23B-204ENST00000571018 CLNKQ7Z7G1 428 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 GPR180Q86V85 440 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 BEST3Q8N1M1 668 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 RIBC1Q8N443 379 aaPredicted RBP11.84□□□□□ -0.51
TVP23B-204ENST00000571018 KIF2BQ8N4N8 673 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 APCDD1LQ8NCL9 501 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 C7orf57Q8NEG2 295 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 B3GNT7Q8NFL0 401 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 OR1N1Q8NGS0 311 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 OR2W6PQ8NHA6 318 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 CAVIN3Q969G5 261 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 CCDC126Q96EE4 140 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 C19orf60Q96EN9 201 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 ZNF382Q96SR6 550 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 ALOXE3Q9BYJ1 711 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 ELOVL6Q9H5J4 265 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 ADAP2Q9NPF8 381 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 PNO1Q9NRX1 252 aaKnown RBP11.84□□□□□ -0.51
TVP23B-204ENST00000571018 VTI1BQ9UEU0 232 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.84□□□□□ -0.51
TVP23B-204ENST00000571018 PHF11Q9UIL8 331 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 SNX6Q9UNH7 406 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 NTNG1Q9Y2I2 539 aa11.84□□□□□ -0.51
TVP23B-204ENST00000571018 V9GYY5 206 aaPredicted RBP11.84□□□□□ -0.51
TVP23B-204ENST00000571018 TLDC2A0PJX2 215 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms