RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CCDC77Q9BR77 488 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 TBCDQ9BTW9 1192 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 MS4A8Q9BY19 250 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 TSPAN10Q9H1Z9 355 aaPredicted RBP11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 LYRM4Q9HD34 91 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 SNX15Q9NRS6 342 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 ZDHHC18Q9NUE0 388 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 MTRF1LQ9UGC7 380 aaKnown RBP11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 SH3BGRL2Q9UJC5 107 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 DAPP1Q9UN19 280 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 ANGPTL3Q9Y5C1 460 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 SPACA6W5XKT8 324 aa11.54□□□□□ -0.56
CTDNEP1-205ENST00000570828 CCDC189A1A4V9 331 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 POM121CA8CG34 1229 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 NPIPA5E9PKD4 350 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 TGFBR3LH3BV60 316 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 CYR61O00622 381 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 NME2P1O60361 137 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 SLC19A2O60779 497 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 C2P06681 752 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 ZNF24P17028 368 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 NME2P22392 152 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 PPP2R1BP30154 601 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 CA7P43166 264 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 SSR2P43308 183 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 IRF9Q00978 393 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 STX4Q12846 297 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 DDX39BQ13838 428 aaKnown RBP11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 E2F2Q14209 437 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 ELAVL1Q15717 326 aaKnown RBP11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 GRHL2Q6ISB3 625 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 CHSY3Q70JA7 882 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 LAS2Q8IYD9 372 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 CENPLQ8N0S6 344 aaPredicted RBP11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 ARMC10Q8N2F6 343 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 TMEM132CQ8N3T6 1108 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 TMEM156Q8N614 296 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 TEX9Q8N6V9 391 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 RHEBL1Q8TAI7 183 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 ZNF473Q8WTR7 871 aaKnown RBP11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 NCLNQ969V3 563 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 CMTM7Q96FZ5 175 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 CENPKQ9BS16 269 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 ACSS3Q9H6R3 686 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 PRDM7Q9NQW5 492 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 NINJ2Q9NZG7 142 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 NPIPA1Q9UND3 350 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 PPIEQ9UNP9 301 aaKnown RBP11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 KLF13Q9Y2Y9 288 aaPredicted RBP11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 CLCA3PQ9Y6N3 262 aa11.53□□□□□ -0.56
CTDNEP1-205ENST00000570828 CELSR2Q9HCU4 2923 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 A0A096LPK6 155 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 RTCAO00442 366 aaKnown RBP11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 CCL21O00585 134 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 CTNSO60931 367 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 SH3BGRLO75368 114 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 ITGA10O75578 1167 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 MTHFD2P13995 350 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 HIST1H1TP22492 207 aaPredicted RBP11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 ATP5A1P25705 553 aaKnown RBP11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 TYK2P29597 1187 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 RAP1GDS1P52306 607 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 ALDH18A1P54886 795 aaKnown RBP11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 PHEXP78562 749 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 SERTAD2Q14140 314 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 NAA30Q147X3 362 aaPredicted RBP11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 SETDB1Q15047 1291 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 ACAP2Q15057 778 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 PFKFB4Q16877 469 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 AP5B1Q2VPB7 878 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 CRYBG3Q68DQ2 2970 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZNF793Q6ZN11 406 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 UBE3DQ7Z6J8 389 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 CYP4Z2PQ8N1L4 340 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 ACOT4Q8N9L9 421 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 MNS1Q8NEH6 495 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR7G3Q8NG95 312 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZNF592Q92610 1267 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 DAZLQ92904 295 aaKnown RBP11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 MAPKAP1Q9BPZ7 522 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 TSPYL1Q9H0U9 437 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 TRIM45Q9H8W5 580 aaPredicted RBP11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 ACTR8Q9H981 624 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 ADGRE2Q9UHX3 823 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 CLDN16Q9Y5I7 305 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 IKBKGQ9Y6K9 419 aa11.52□□□□□ -0.57
CTDNEP1-205ENST00000570828 HMX2A2RU54 273 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 PRSS44E7EML9 344 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 SAP18O00422 153 aaKnown RBP11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZFAND5O76080 213 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 SCELO95171 688 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 KLHL2O95198 593 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 ACSL3O95573 720 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 TGFB1P01137 390 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 ALDOAP04075 364 aaKnown RBP11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 INHBAP08476 426 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 PIK3CBP42338 1070 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 PIK3CGP48736 1102 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms