RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 DHX58Q96C10 678 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 RHBDF1Q96CC6 855 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 LGALS12Q96DT0 336 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 OXNAD1Q96HP4 312 aaPredicted RBP4.32□□□□□ -1.72
CHD9-220ENST00000569794 METTL2AQ96IZ6 378 aaKnown RBP4.32□□□□□ -1.72
CHD9-220ENST00000569794 ZNF582Q96NG8 517 aaPredicted RBP4.32□□□□□ -1.72
CHD9-220ENST00000569794 BTBD9Q96Q07 612 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 FTHL17Q9BXU8 183 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 LRRCC1Q9C099 1032 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 NACA2Q9H009 215 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 DCLRE1BQ9H816 532 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 MKKSQ9NPJ1 570 aaPredicted RBP4.32□□□□□ -1.72
CHD9-220ENST00000569794 OSER1Q9NX31 292 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 RHCGQ9UBD6 479 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 RUVBL2Q9Y230 463 aaKnown RBP4.32□□□□□ -1.72
CHD9-220ENST00000569794 MRPS33Q9Y291 106 aaKnown RBP4.32□□□□□ -1.72
CHD9-220ENST00000569794 NOSIPQ9Y314 301 aaKnown RBP4.32□□□□□ -1.72
CHD9-220ENST00000569794 MRPS2Q9Y399 296 aaKnown RBP4.32□□□□□ -1.72
CHD9-220ENST00000569794 STON1Q9Y6Q2 735 aa4.32□□□□□ -1.72
CHD9-220ENST00000569794 SF3B1O75533 1304 aaKnown RBP eCLIP4.31□□□□□ -1.72
CHD9-220ENST00000569794 TMEM89A2RUT3 159 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 TMEM221A6NGB7 291 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 PRSS46E5RG02 174 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 CETN3O15182 167 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 OGTO15294 1046 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 NDUFS7O75251 213 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 UBTFL6P0CB48 400 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 ZCCHC18P0CG32 403 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 SP9P0CG40 484 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 S1PR1P21453 382 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 ADRA1AP35348 466 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 CHI3L1P36222 383 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 EIF2S3P41091 472 aaKnown RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 CDX1P47902 265 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 METAP2P50579 478 aaKnown RBP eCLIP4.31□□□□□ -1.72
CHD9-220ENST00000569794 PRMT2P55345 433 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 CD81P60033 236 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 RPS8P62241 208 aaKnown RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 CCZ1BP86790 482 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 CCZ1P86791 482 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 TGM3Q08188 693 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 SLC20A2Q08357 652 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 NEDD9Q14511 834 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 LPAL2Q16609 132 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 BCL7AQ4VC05 210 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 CMPK2Q5EBM0 449 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 PAPPA-AS1Q5QFB9 102 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 ZC2HC1BQ5TFG8 222 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 LYSMD4Q5XG99 296 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 TTC19Q6DKK2 380 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 BLOC1S2Q6QNY1 142 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 ARHGAP22Q7Z5H3 698 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 LONP2Q86WA8 852 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.31□□□□□ -1.72
CHD9-220ENST00000569794 ARHGAP24Q8N264 748 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 RYBPQ8N488 228 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 EMC1Q8N766 993 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 PAPD5Q8NDF8 572 aaKnown RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 GOLGA5Q8TBA6 731 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 U2AF1L4Q8WU68 220 aaKnown RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 GGHQ92820 318 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 RFT1Q96AA3 541 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 PYCR2Q96C36 320 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 C11orf24Q96F05 449 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 C4orf36Q96KX1 117 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 SENP8Q96LD8 212 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 RASL10BQ96S79 203 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 DCTN5Q9BTE1 182 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 PRRG4Q9BZD6 226 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 TRPV6Q9H1D0 765 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 UPF2Q9HAU5 1272 aaKnown RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 SEBOXQ9HB31 216 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 C1RLQ9NZP8 487 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 THEGQ9P2T0 379 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 NOCTQ9UK39 431 aaKnown RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 TTC7AQ9ULT0 858 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 NFE2L3Q9Y4A8 694 aa4.31□□□□□ -1.72
CHD9-220ENST00000569794 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.31□□□□□ -1.727e-7■■□□□ 11.9
CHD9-220ENST00000569794 V9GYY5 206 aaPredicted RBP4.31□□□□□ -1.72
CHD9-220ENST00000569794 TNIKQ9UKE5 1360 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 ATXN2Q99700 1313 aaKnown RBP4.3□□□□□ -1.72
CHD9-220ENST00000569794 CENPJQ9HC77 1338 aaPredicted RBP4.3□□□□□ -1.72
CHD9-220ENST00000569794 MAGEB16A2A368 324 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 ARHGEF35A5YM69 484 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 NEMP2A6NFY4 417 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 PMS2P5A8MQ11 134 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 RNF113AO15541 343 aaKnown RBP4.3□□□□□ -1.72
CHD9-220ENST00000569794 ADAM12O43184 909 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 CRLF1O75462 422 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 MTRF1O75570 445 aaKnown RBP4.3□□□□□ -1.72
CHD9-220ENST00000569794 RPS6KA5O75582 802 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 NUDT17P0C025 328 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 CDH1P12830 882 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 HLA-DOBP13765 273 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 GNSP15586 552 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 EPCAMP16422 314 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 CD58P19256 250 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 ELAVL4P26378 380 aaKnown RBP4.3□□□□□ -1.72
CHD9-220ENST00000569794 CHATP28329 748 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 SSTR1P30872 391 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms