RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ITGAMP11215 1152 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 HSD3B1P14060 373 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 IL12RB1P42701 662 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 CLCNKAP51800 687 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 PRKAG1P54619 331 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 MANFP55145 182 aaKnown RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 TUBA3CQ13748 450 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 VEZF1Q14119 521 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 MAPK11Q15759 364 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 MOGQ16653 247 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 ADPRMQ3LIE5 342 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 DHRS4L2Q6PKH6 230 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 TSEN54Q7Z6J9 526 aaKnown RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 FAM124AQ86V42 546 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 AMZ2Q86W34 360 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 CROCCP3Q8IVE0 287 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 TAGAPQ8N103 731 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 COQ8BQ96D53 544 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 FAM129BQ96TA1 746 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 CTPS2Q9NRF8 586 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 ENPP5Q9UJA9 477 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 RNF6Q9Y252 685 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 LYVE1Q9Y5Y7 322 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 IRAK3Q9Y616 596 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 VCANP13611 3396 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 SCN8AQ9UQD0 1980 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 TRAV6A0A075B6T7 132 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 LOC100506127A0A0U1RQW1 187 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 LINC01553A4QN01 128 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 PRAMEF25A6NGN4 478 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 RNASET2O00584 256 aaKnown RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 KIAA0355O15063 1070 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 PRKRAO75569 313 aaKnown RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 FGF19O95750 216 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 BCHEP06276 602 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 OCM2P0CE71 109 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 OCMP0CE72 109 aaPredicted RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 GABARAPL2P60520 117 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 SLC35A2P78381 396 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 ELP6Q0PNE2 266 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 TP53BP2Q13625 1128 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 ELAVL3Q14576 367 aaKnown RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 SSPNQ14714 243 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 CTF1Q16619 201 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 DUSP7Q16829 419 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 IFI44LQ53G44 452 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 TMEM53Q6P2H8 277 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 CEACAM20Q6UY09 585 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 KIAA0907Q7Z7F0 614 aaPredicted RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 P2RY8Q86VZ1 359 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 ZBTB8BQ8NAP8 495 aaPredicted RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 LZICQ8WZA0 190 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 LRIG1Q96JA1 1093 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 YIPF4Q9BSR8 244 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 COPS4Q9BT78 406 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 IMP3Q9NV31 184 aaKnown RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 TAS2R16Q9NYV7 291 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 TAS2R9Q9NYW1 312 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 NDRG4Q9ULP0 352 aaKnown RBP8.36□□□□□ -1.07
LINC00558-201ENST00000569422 EDARQ9UNE0 448 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 PCDHGA6Q9Y5G7 932 aa8.36□□□□□ -1.07
LINC00558-201ENST00000569422 TSPAN11A1L157 253 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 TMEM229AB2RXF0 380 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 C5orf58C9J3I9 102 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 PI15O43692 258 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 OR1F1O43749 312 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 WBP4O75554 376 aaKnown RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 ACP5P13686 325 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 CD36P16671 472 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 IL1RNP18510 177 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 ITIH1P19827 911 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 ITGB7P26010 798 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 MAT2AP31153 395 aaKnown RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 GALNSP34059 522 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 IDUAP35475 653 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 FEN1P39748 380 aaKnown RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 P2RY2P41231 377 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 ST13P50502 369 aaKnown RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 MVDP53602 400 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 MAPK12P53778 367 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 KRT33BQ14525 404 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 LEXMQ3ZCV2 418 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 FAM109BQ6ICB4 259 aaPredicted RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 TRIM40Q6P9F5 258 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 ERN2Q76MJ5 926 aaKnown RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 NLRP8Q86W28 1048 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 C17orf64Q86WR6 236 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 RAD51AP1Q96B01 352 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 OTUB2Q96DC9 234 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 BHLHE41Q9C0J9 482 aaPredicted RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 CXorf36Q9H7Y0 433 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 IMPAD1Q9NX62 359 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 GPR83Q9NYM4 423 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 MARK1Q9P0L2 795 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 KCNK6Q9Y257 313 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 REV3LO60673 3130 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 EDDM13A0A1B0GTR0 161 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 TRBC2A0A5B9 178 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 GPR37L1O60883 481 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 NME6O75414 186 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms