RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CENPEQ02224 2701 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 TGFBR3LH3BV60 316 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 CYR61O00622 381 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 CTNSO60931 367 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 SLC25A12O75746 678 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 NEURL1O76050 574 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 MLYCDO95822 493 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 TGFB1P01137 390 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 SP1P08047 785 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 ATP5A1P25705 553 aaKnown RBP13.48□□□□□ -0.25
CMTM3-215ENST00000568477 PPP2R1BP30154 601 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 SSR2P43308 183 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 CYB561P49447 251 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 SERPINB9P50453 376 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 DDX39BQ13838 428 aaKnown RBP13.48□□□□□ -0.25
CMTM3-215ENST00000568477 AP5B1Q2VPB7 878 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 KHDRBS2Q5VWX1 349 aaKnown RBP13.48□□□□□ -0.25
CMTM3-215ENST00000568477 SLC25A25Q6KCM7 469 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 LRIG3Q6UXM1 1119 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 ZNF793Q6ZN11 406 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 GALNTL5Q7Z4T8 443 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 UBE3DQ7Z6J8 389 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 CLNKQ7Z7G1 428 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 ACOT4Q8N9L9 421 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 FAM98AQ8NCA5 519 aaKnown RBP13.48□□□□□ -0.25
CMTM3-215ENST00000568477 APCDD1LQ8NCL9 501 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 VMP1Q96GC9 406 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 GPR78Q96P69 363 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 CCDC77Q9BR77 488 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 ACTR8Q9H981 624 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 CPSF2Q9P2I0 782 aaKnown RBP13.48□□□□□ -0.25
CMTM3-215ENST00000568477 FBXW2Q9UKT8 454 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 PPIEQ9UNP9 301 aaKnown RBP13.48□□□□□ -0.25
CMTM3-215ENST00000568477 CLDN16Q9Y5I7 305 aa13.48□□□□□ -0.25
CMTM3-215ENST00000568477 TNPO3Q9Y5L0 923 aaKnown RBP13.48□□□□□ -0.25
CMTM3-215ENST00000568477 ASPDHA6ND91 283 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 RTCAO00442 366 aaKnown RBP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 KLK8O60259 260 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 SH3BGRLO75368 114 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 SCELO95171 688 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 CLDN1O95832 211 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 IFNA16P05015 189 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 HIST1H1TP22492 207 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 TRHRP34981 398 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 HSD17B3P37058 310 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 PIK3CBP42338 1070 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 PIK3CGP48736 1102 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 HLCSP50747 726 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 RAP1GDS1P52306 607 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 PHEXP78562 749 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 SRSF11Q05519 484 aaKnown RBP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 RBPJQ06330 500 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 STX4Q12846 297 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 GTF2H2Q13888 395 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 PCBP2Q15366 365 aaKnown RBP eCLIP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 ELAVL1Q15717 326 aaKnown RBP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 TECRLQ5HYJ1 363 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 ZNF468Q5VIY5 522 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 C1QL3Q5VWW1 255 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 LIPJQ5W064 366 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 GTF2H2CQ6P1K8 395 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 FJX1Q86VR8 437 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 ARMC10Q8N2F6 343 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 TMEM132CQ8N3T6 1108 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 HUS1BQ8NHY5 278 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 THAP3Q8WTV1 239 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 NCLNQ969V3 563 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 TMEM125Q96AQ2 219 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 REPS1Q96D71 796 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 PAFAH2Q99487 392 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 SH3GL2Q99962 352 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 MAPKAP1Q9BPZ7 522 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 CENPKQ9BS16 269 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 TRIM45Q9H8W5 580 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-215ENST00000568477 DMRT3Q9NQL9 472 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 KCMF1Q9P0J7 381 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 PCDHGA11Q9Y5H2 935 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 CLCA3PQ9Y6N3 262 aa13.47□□□□□ -0.25
CMTM3-215ENST00000568477 MYO7BQ6PIF6 2116 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 LRRC14BA6NHZ5 514 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 SAP18O00422 153 aaKnown RBP13.46□□□□□ -0.25
CMTM3-215ENST00000568477 NME2P1O60361 137 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 UGDHO60701 494 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 KRT38O76015 456 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 RBP1P09455 135 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 NME2P22392 152 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 MAGEA12P43365 314 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 ALDH6A1Q02252 535 aaKnown RBP13.46□□□□□ -0.25
CMTM3-215ENST00000568477 SERTAD2Q14140 314 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 MAPKAPK3Q16644 382 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 DEPDC1Q5TB30 811 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 METTL2BQ6P1Q9 378 aaKnown RBP13.46□□□□□ -0.25
CMTM3-215ENST00000568477 TRMT10CQ7L0Y3 403 aaKnown RBP13.46□□□□□ -0.25
CMTM3-215ENST00000568477 GOLGA7Q7Z5G4 137 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 PLD6Q8N2A8 252 aaKnown RBP13.46□□□□□ -0.25
CMTM3-215ENST00000568477 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.25
CMTM3-215ENST00000568477 PTGR2Q8N8N7 351 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-215ENST00000568477 DAZLQ92904 295 aaKnown RBP13.46□□□□□ -0.25
CMTM3-215ENST00000568477 RELTQ969Z4 430 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms