RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	HSD3B1	P14060	373 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	ITGA3	P26006	1051 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	HSD3B2	P26439	372 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	TPP2	P29144	1249 aa	Predicted RBP	15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	SSR2	P43308	183 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	FOXA1	P55317	472 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	HNRNPH2	P55795	449 aa	Known RBP	15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	KLRB1	Q12918	225 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	IFT88	Q13099	833 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	SLAMF1	Q13291	335 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	RAPSN	Q13702	412 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	KRT71	Q3SY84	523 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	ARMC10	Q8N2F6	343 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	CDYL2	Q8N8U2	506 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	FAM47B	Q8NA70	645 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705		Q8NA96	180 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	M1AP	Q8TC57	530 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	ELP5	Q8TE02	316 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	PPP4R1	Q8TF05	950 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	ANKRD9	Q96BM1	317 aa	Predicted RBP	15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	MTFMT	Q96DP5	389 aa	Known RBP	15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	THOC3	Q96J01	351 aa	Known RBP	15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	FAM111A	Q96PZ2	611 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	GATA5	Q9BWX5	397 aa	Predicted RBP	15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	ELOVL6	Q9H5J4	265 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	COPS7B	Q9H9Q2	264 aa	Predicted RBP	15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	MMP25	Q9NPA2	562 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	ANAPC2	Q9UJX6	822 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	SNX6	Q9UNH7	406 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	ATG4B	Q9Y4P1	393 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	ACTL7B	Q9Y614	415 aa		15.52	■□□□□ 0.08
INO80E-210	ENST00000567705	SORBS2	O94875	1100 aa	Known RBP	15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	ITGAM	P11215	1152 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	ALDH3A1	P30838	453 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	ARRB2	P32121	409 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	HTR6	P50406	440 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	SLC26A5	P58743	744 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	KCNC4	Q03721	635 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	CRB2	Q5IJ48	1285 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	MFSD4B	Q5TF39	518 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	PAPD4	Q6PIY7	484 aa	Known RBP	15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	RNF165	Q6ZSG1	346 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	GPR180	Q86V85	440 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	APCDD1L	Q8NCL9	501 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	BRIX1	Q8TDN6	353 aa	Known RBP	15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	KCNA7	Q96RP8	456 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	LMF1	Q96S06	567 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	SMC6	Q96SB8	1091 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	NPAS2	Q99743	824 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	CENPK	Q9BS16	269 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	MRPL1	Q9BYD6	325 aa	Known RBP	15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	TRIM4	Q9C037	500 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	PRTFDC1	Q9NRG1	225 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	SIRT5	Q9NXA8	310 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	MS4A12	Q9NXJ0	267 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	VTI1B	Q9UEU0	232 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	MID2	Q9UJV3	735 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705	CCL27	Q9Y4X3	112 aa		15.51	■□□□□ 0.07
INO80E-210	ENST00000567705		A0A1W2PR48	441 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	SYNDIG1L	A6NDD5	238 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	SAGE2P	A6NJ88	616 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	NPIPB8	E9PQR5	432 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	CLDN4	O14493	209 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	TRIM13	O60858	407 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	SPAG7	O75391	227 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	DHRS4L1	P0CG22	281 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	CASR	P41180	1078 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	OR4D2	P58180	307 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	TNFRSF17	Q02223	184 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	CSTF3	Q12996	717 aa	Known RBP	15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	MPP2	Q14168	576 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	RCN2	Q14257	317 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	EXT1	Q16394	746 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	AGAP7P	Q5VUJ5	663 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705		Q6ZS92	163 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	TRIM46	Q7Z4K8	759 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	NUDT13	Q86X67	352 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	CCNYL1	Q8N7R7	359 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	METTL6	Q8TCB7	284 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	CHTF18	Q8WVB6	975 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	SELENOM	Q8WWX9	145 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	AGAP4	Q96P64	663 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	LPAR4	Q99677	370 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	TRMO	Q9BU70	441 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	ACPT	Q9BZG2	426 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	CLMP	Q9H6B4	373 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	MRPS33	Q9Y291	106 aa	Known RBP	15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	CPAMD8	Q8IZJ3	1885 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	FLNC	Q14315	2725 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	SCN2A	Q99250	2005 aa		15.5	■□□□□ 0.07
INO80E-210	ENST00000567705	RGS16	O15492	202 aa	Predicted RBP	15.49	■□□□□ 0.07
INO80E-210	ENST00000567705	ULK1	O75385	1050 aa		15.49	■□□□□ 0.07
INO80E-210	ENST00000567705	ERLIN1	O75477	346 aa		15.49	■□□□□ 0.07
INO80E-210	ENST00000567705	KRT6A	P02538	564 aa		15.49	■□□□□ 0.07
INO80E-210	ENST00000567705	KRT6B	P04259	564 aa		15.49	■□□□□ 0.07
INO80E-210	ENST00000567705	ALPP	P05187	535 aa		15.49	■□□□□ 0.07
INO80E-210	ENST00000567705	FAM58BP	P0C7Q3	252 aa		15.49	■□□□□ 0.07
INO80E-210	ENST00000567705	CHN1	P15882	459 aa		15.49	■□□□□ 0.07
INO80E-210	ENST00000567705	PPP2R1B	P30154	601 aa		15.49	■□□□□ 0.07
INO80E-210	ENST00000567705	KRT6C	P48668	564 aa		15.49	■□□□□ 0.07

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms