RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CLMPQ9H6B4 373 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 FZD3Q9NPG1 666 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 HINT3Q9NQE9 182 aaKnown RBP4.01□□□□□ -1.77
LINC00561-201ENST00000565815 SLC38A7Q9NVC3 462 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 PAK5Q9P286 719 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 DNPEPQ9ULA0 475 aa4.01□□□□□ -1.77
LINC00561-201ENST00000565815 CENPFP49454 3210 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 BRCA2P51587 3418 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 SGK1O00141 431 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 PRRG1O14668 218 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 MCF2LO15068 1137 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 GM2AP17900 193 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 CD38P28907 300 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 RPL9P32969 192 aaKnown RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 PTGER1P34995 402 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 NAMPTP43490 491 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 HSPA13P48723 471 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 PCYT1AP49585 367 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 LIG4P49917 911 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 UCNP55089 124 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 TAS2R40P59535 323 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 GPX6P59796 221 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 SPOCK1Q08629 439 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 ASPHQ12797 758 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 TRIP13Q15645 432 aaPredicted RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 DCAF4L1Q3SXM0 396 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 HSP90AA5PQ58FG0 334 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 ACSBG2Q5FVE4 666 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 ARMC3Q5W041 872 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 DCUN1D2Q6PH85 259 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 MFSD7Q6UXD7 560 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 C3orf62Q6ZUJ4 267 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 CRLF3Q8IUI8 442 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 WDR49Q8IV35 697 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 MIPOL1Q8TD10 442 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 CCDC127Q96BQ5 260 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 HAUS1Q96CS2 278 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 RRNAD1Q96FB5 475 aaKnown RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 TXNDC15Q96J42 360 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 FAM110AQ9BQ89 295 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 C11orf70Q9BRQ4 267 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 MAK16Q9BXY0 300 aaKnown RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 RBM38Q9H0Z9 239 aaKnown RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 SLCO1B3Q9NPD5 702 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 KRCC1Q9NPI7 259 aaPredicted RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 PLSCR4Q9NRQ2 329 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 WSB2Q9NYS7 404 aaPredicted RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 TAS2R1Q9NYW7 299 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 ITGA11Q9UKX5 1188 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 C2CD2Q9Y426 696 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 SPTBN4Q9H254 2564 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 PDCD11Q14690 1871 aaKnown RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 COPEO14579 308 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 CDX4O14627 284 aaPredicted RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 CASQ2O14958 399 aaPredicted RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 ENTPD5O75356 428 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 EGFP01133 1207 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 PABPC4LP0CB38 370 aaKnown RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF182P17025 639 aaPredicted RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 CEBPBP17676 345 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 CDC25CP30307 473 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 PEX19P40855 299 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 OLIG2Q13516 323 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 TYW3Q6IPR3 259 aaKnown RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF549Q6P9A3 640 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 IL27RAQ6UWB1 636 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 SH2D5Q6ZV89 423 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 EGFL6Q8IUX8 553 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 MAP7D3Q8IWC1 876 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 ADGRF2Q8IZF7 708 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 C4orf33Q8N1A6 199 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 DRAXINQ8NBI3 349 aaPredicted RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 SLC4A11Q8NBS3 891 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 DEFB124Q8NES8 71 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 OR8K5Q8NH50 307 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 ECSITQ9BQ95 431 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 SYT15Q9BQS2 421 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 ADPGKQ9BRR6 497 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 TRMOQ9BU70 441 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 LRRC4Q9HBW1 653 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 PRMT7Q9NVM4 692 aaPredicted RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 RALYQ9UKM9 306 aaKnown RBP4□□□□□ -1.77
LINC00561-201ENST00000565815 GRID1Q9ULK0 1009 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 PLLPQ9Y342 182 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 GMEB1Q9Y692 573 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 BAHCC1Q9P281 2608 aa4□□□□□ -1.77
LINC00561-201ENST00000565815 CACNA1GO43497 2377 aa3.99□□□□□ -1.77
LINC00561-201ENST00000565815 TDRD15B5MCY1 1934 aaKnown RBP3.99□□□□□ -1.77
LINC00561-201ENST00000565815 GOLGA8QA0A0J9YX86 632 aa3.99□□□□□ -1.77
LINC00561-201ENST00000565815 GOLGA8OA6NCC3 632 aa3.99□□□□□ -1.77
LINC00561-201ENST00000565815 OR6C75A6NL08 312 aa3.99□□□□□ -1.77
LINC00561-201ENST00000565815 GOLGA8NF8WBI6 632 aa3.99□□□□□ -1.77
LINC00561-201ENST00000565815 RRP8O43159 456 aaKnown RBP3.99□□□□□ -1.77
LINC00561-201ENST00000565815 HSPA12AO43301 675 aa3.99□□□□□ -1.77
LINC00561-201ENST00000565815 SNNO75324 88 aaPredicted RBP3.99□□□□□ -1.77
LINC00561-201ENST00000565815 TOMM40O96008 361 aa3.99□□□□□ -1.77
LINC00561-201ENST00000565815 ASS1P00966 412 aaKnown RBP3.99□□□□□ -1.77
LINC00561-201ENST00000565815 LYNP07948 512 aa3.99□□□□□ -1.77
LINC00561-201ENST00000565815 SERPINF2P08697 491 aa3.99□□□□□ -1.77
LINC00561-201ENST00000565815 ANPEPP15144 967 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms