RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 YARS2Q9Y2Z4 477 aaKnown RBP18.51■□□□□ 0.55
CLN6-206ENST00000565471 TSC22D4Q9Y3Q8 395 aa18.51■□□□□ 0.55
CLN6-206ENST00000565471 CLCA3PQ9Y6N3 262 aa18.51■□□□□ 0.55
CLN6-206ENST00000565471 SPACA6W5XKT8 324 aa18.51■□□□□ 0.55
CLN6-206ENST00000565471 HMX2A2RU54 273 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 IFNA16P05015 189 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 PCNAP12004 261 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 HIST1H1TP22492 207 aaPredicted RBP18.5■□□□□ 0.55
CLN6-206ENST00000565471 SSR4P51571 173 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 STX4Q12846 297 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 BMPR2Q13873 1038 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 SETDB1Q15047 1291 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 ACAP2Q15057 778 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 AP5B1Q2VPB7 878 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 RNFT1Q5M7Z0 435 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 MROH9Q5TGP6 573 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 XKRXQ6PP77 449 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 BNC2Q6ZN30 1099 aaPredicted RBP18.5■□□□□ 0.55
CLN6-206ENST00000565471 GPALPP1Q8IXQ4 340 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 MAPKAP1Q9BPZ7 522 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 ALOXE3Q9BYJ1 711 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 SNX15Q9NRS6 342 aa18.5■□□□□ 0.55
CLN6-206ENST00000565471 RTCAO00442 366 aaKnown RBP18.49■□□□□ 0.55
CLN6-206ENST00000565471 KLK8O60259 260 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 PRKNO60260 465 aaPredicted RBP18.49■□□□□ 0.55
CLN6-206ENST00000565471 TGFB1P01137 390 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 ESRRAP11474 423 aaPredicted RBP18.49■□□□□ 0.55
CLN6-206ENST00000565471 AGAP20933 346 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 PHBP35232 272 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 PIK3CBP42338 1070 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 MEOX1P50221 254 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 IRF9Q00978 393 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 DEPDC1Q5TB30 811 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 KHDRBS2Q5VWX1 349 aaKnown RBP18.49■□□□□ 0.55
CLN6-206ENST00000565471 HSDL2Q6YN16 418 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 CEP128Q6ZU80 1094 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 RELL1Q8IUW5 271 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 LURAP1LQ8IV03 231 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 SULF2Q8IWU5 870 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 CHERPQ8IWX8 916 aaKnown RBP18.49■□□□□ 0.55
CLN6-206ENST00000565471 PTPMT1Q8WUK0 201 aaPredicted RBP18.49■□□□□ 0.55
CLN6-206ENST00000565471 MARVELD3Q96A59 401 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 ACSS3Q9H6R3 686 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 TIMMDC1Q9NPL8 285 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 MYOTQ9UBF9 498 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 ANGPTL3Q9Y5C1 460 aa18.49■□□□□ 0.55
CLN6-206ENST00000565471 ITPR2Q14571 2701 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 A0A096LPK6 155 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 TMEM200CA6NKL6 621 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 PEX1O43933 1283 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 UGDHO60701 494 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 KLHL2O95198 593 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 ABOP16442 354 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 SSR2P43308 183 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 SMSP52788 366 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 ARFIP1P53367 373 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 ALDH18A1P54886 795 aaKnown RBP18.48■□□□□ 0.55
CLN6-206ENST00000565471 ADORA2A-AS1P86434 159 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 LIPJQ5W064 366 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 KLC3Q6P597 504 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 TEX9Q8N6V9 391 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 ZFP62Q8NB50 900 aaPredicted RBP18.48■□□□□ 0.55
CLN6-206ENST00000565471 OR8K3Q8NH51 312 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 C16orf52Q8NHV5 167 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 PRM3Q9NNZ6 103 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 MS4A12Q9NXJ0 267 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 MEMO1Q9Y316 297 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 PCDHGA11Q9Y5H2 935 aa18.48■□□□□ 0.55
CLN6-206ENST00000565471 NCOA6Q14686 2063 aaPredicted RBP18.48■□□□□ 0.55
CLN6-206ENST00000565471 ARHGAP10A1A4S6 786 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 A8MVJ9 347 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 TFECO14948 347 aaPredicted RBP18.47■□□□□ 0.55
CLN6-206ENST00000565471 LDB3O75112 727 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 OR2J2O76002 312 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 ALDOAP04075 364 aaKnown RBP18.47■□□□□ 0.55
CLN6-206ENST00000565471 TUBB4AP04350 444 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 GFAPP14136 432 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 CPN2P22792 545 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 SERPINB8P50452 374 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 IGLV3-21P80748 117 aaPredicted RBP18.47■□□□□ 0.55
CLN6-206ENST00000565471 PCBP2Q15366 365 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLN6-206ENST00000565471 UAP1Q16222 522 aaPredicted RBP18.47■□□□□ 0.55
CLN6-206ENST00000565471 PFKFB4Q16877 469 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 WHAMMP3Q1A5X7 153 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 ZNF630Q2M218 657 aaPredicted RBP18.47■□□□□ 0.55
CLN6-206ENST00000565471 OR4C11Q6IEV9 310 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 METTL2BQ6P1Q9 378 aaKnown RBP18.47■□□□□ 0.55
CLN6-206ENST00000565471 MDGA2Q7Z553 956 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 HUS1BQ8NHY5 278 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 ASB15Q8WXK1 588 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 ANKRD9Q96BM1 317 aaPredicted RBP18.47■□□□□ 0.55
CLN6-206ENST00000565471 MRRFQ96E11 262 aaKnown RBP18.47■□□□□ 0.55
CLN6-206ENST00000565471 GPR78Q96P69 363 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 CENPKQ9BS16 269 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 FUT8Q9BYC5 575 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 OR51B5Q9H339 312 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 RUBCNLQ9H714 662 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 ACTR8Q9H981 624 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 CHST11Q9NPF2 352 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 DMRT3Q9NQL9 472 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms