RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 LPAR1Q92633 364 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 AKAP1Q92667 903 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMG1-207ENST00000563235 ITPKCQ96DU7 683 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ANKRD36BP1Q96IX9 119 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 KRT12Q99456 494 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 OLFM1Q99784 485 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 KLHDC3Q9BQ90 382 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 GSDMCQ9BYG8 508 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 OR2B2Q9GZK3 357 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 OR51B5Q9H339 312 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 EBF2Q9HAK2 575 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SGK2Q9HBY8 427 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 RANGRFQ9HD47 186 aaPredicted RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 PXMP2Q9NR77 195 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SLC6A13Q9NSD5 602 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SAMSN1Q9NSI8 373 aaKnown RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 THUMPD1Q9NXG2 353 aaKnown RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 NCKIPSDQ9NZQ3 722 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 FBXL3Q9UKT7 428 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 DHRS7Q9Y394 339 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 GRIP1Q9Y3R0 1128 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ZNF175Q9Y473 711 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 URGCP-MRPS24S4R325 110 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 PXDNQ92626 1479 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 KNDC1Q76NI1 1749 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 KIF24Q5T7B8 1368 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 DCDC2BA2VCK2 349 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PRSS37A4D1T9 235 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 MBLAC1A4D2B0 266 aaPredicted RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 E5RI56 91 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 H3BMM5 538 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 LRP3O75074 770 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 OAZ2O95190 189 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 MOCS3O95396 460 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 ADAP00813 363 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 ZNF18P17022 549 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 ITGAXP20702 1163 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 SLC8A1P32418 973 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 RGRP47804 291 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PRKAG1P54619 331 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 C21orf59P57076 290 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 EEFSECP57772 596 aaKnown RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 CDK16Q00536 496 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 MEF2AQ02078 507 aaPredicted RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 DSC1Q08554 894 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 SERTAD2Q14140 314 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 CCDC58Q4VC31 144 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 TMEM63BQ5T3F8 832 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 RFWD3Q6PCD5 774 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 MPZL3Q6UWV2 235 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 RNF130Q86XS8 419 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 ZBED8Q8IZ13 594 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 LRRC17Q8N6Y2 441 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 NSUN7Q8NE18 718 aaKnown RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 RAB40AQ8WXH6 277 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 RPL3LQ92901 407 aaKnown RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 EMG1Q92979 244 aaKnown RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 FUBP1Q96AE4 644 aaKnown RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 SYTL4Q96C24 671 aaPredicted RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 HARBI1Q96MB7 349 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PWWP2AQ96N64 755 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 CLIC6Q96NY7 704 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 OLFM3Q96PB7 478 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 TM6SF2Q9BZW4 377 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 ATG10Q9H0Y0 220 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 NSUN3Q9H649 340 aaKnown RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 GCM1Q9NP62 436 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 UVRAGQ9P2Y5 699 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 ABCD2Q9UBJ2 740 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 MAN1B1Q9UKM7 699 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 C1orf167Q5SNV9 1468 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PITPNM2Q9BZ72 1349 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 C2orf74A8MZ97 194 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 ZNF213O14771 459 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 MID1O15344 667 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 SH3BGRLO75368 114 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PROS1P07225 676 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 CTSAP10619 480 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 HLA-DMAP28067 261 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PSMB5P28074 263 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 TEAD1P28347 426 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 CDH5P33151 784 aaPredicted RBP4.53□□□□□ -1.68
SMG1-207ENST00000563235 SLC1A2P43004 574 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 RASSF2P50749 326 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 CEBPGP53567 150 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 MVDP53602 400 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PSME3P61289 254 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 HERV-K104P63124 156 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PMPCAQ10713 525 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 NR1I3Q14994 352 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 GSTA3Q16772 222 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 C5orf64Q2M2E5 130 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 ACER2Q5QJU3 275 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 LRIF1Q5T3J3 769 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 GPR107Q5VW38 600 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 SPRYD7Q5W111 196 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 FUT10Q6P4F1 479 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 C4orf22Q6V702 233 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PGAP1Q75T13 922 aa4.53□□□□□ -1.68
SMG1-207ENST00000563235 PRICKLE2Q7Z3G6 844 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms