RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 MAGEA5P43359 124 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 MAN2A2P49641 1150 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 LIM2P55344 173 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 GTF3C1Q12789 2109 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 CHDHQ8NE62 594 aaPredicted RBP15.36■□□□□ 0.05
CMTM3-205ENST00000562707 OR8K3Q8NH51 312 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 PTPMT1Q8WUK0 201 aaPredicted RBP15.36■□□□□ 0.05
CMTM3-205ENST00000562707 NRGNQ92686 78 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 KIAA1191Q96A73 305 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 SARAFQ96BY9 339 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 POM121Q96HA1 1249 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 VPS39Q96JC1 886 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 SCYL1Q96KG9 808 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 PLAC1Q9HBJ0 212 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 ALKBH4Q9NXW9 302 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 GPRC5BQ9NZH0 403 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 DAPP1Q9UN19 280 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 CHMP2BQ9UQN3 213 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 LIPGQ9Y5X9 500 aa15.36■□□□□ 0.05
CMTM3-205ENST00000562707 A0A0G2JNJ9 132 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 FAM95CA0A1B0GW59 222 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 FAM221AA4D161 298 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 CLGNO14967 610 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 SUSD5O60279 629 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 CERS1P27544 350 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 SLC6A12P48065 614 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 RNF4P78317 190 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 SERTAD2Q14140 314 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 TSNQ15631 228 aaKnown RBP15.35■□□□□ 0.05
CMTM3-205ENST00000562707 C18orf21Q32NC0 220 aaPredicted RBP15.35■□□□□ 0.05
CMTM3-205ENST00000562707 SLC25A35Q3KQZ1 300 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 ADPRMQ3LIE5 342 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 ABHD17CQ6PCB6 329 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 ARSKQ6UWY0 536 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 C7orf57Q8NEG2 295 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 NINJ1Q92982 152 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 RHBDF1Q96CC6 855 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 LRRC39Q96DD0 335 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 CSF3RQ99062 836 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 FOXC2Q99958 501 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 TMUB1Q9BVT8 246 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 POLDIP3Q9BY77 421 aaKnown RBP15.35■□□□□ 0.05
CMTM3-205ENST00000562707 ROGDIQ9GZN7 287 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 PRM3Q9NNZ6 103 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 COPS7AQ9UBW8 275 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 Q9UFV3 132 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 EDARQ9UNE0 448 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 L3MBTL1Q9Y468 752 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 FAM215AQ9Y5M1 114 aa15.35■□□□□ 0.05
CMTM3-205ENST00000562707 NCF1BA6NI72 391 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-205ENST00000562707 NCF1CA8MVU1 366 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-205ENST00000562707 C17orf105B2RV13 164 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 NCF1P14598 390 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-205ENST00000562707 GABRA1P14867 456 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 DNASE1L1P49184 302 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 SLC12A2P55011 1212 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 DLX5P56178 289 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 TAS2R39P59534 338 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 MGAT5Q09328 741 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 ZNF460Q14592 562 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 HYAL4Q2M3T9 481 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 C1orf185Q5T7R7 199 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 RTL6Q6ICC9 239 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 ZC3HC1Q86WB0 502 aaKnown RBP15.34■□□□□ 0.05
CMTM3-205ENST00000562707 TCAIMQ8N3R3 496 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 ZNF321PQ8N8H1 164 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 SRFBP1Q8NEF9 429 aaKnown RBP15.34■□□□□ 0.05
CMTM3-205ENST00000562707 SLC2A12Q8TD20 617 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 F2RL3Q96RI0 385 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 OSBPL9Q96SU4 736 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 EHD1Q9H4M9 534 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 CNOT10Q9H9A5 744 aaKnown RBP15.34■□□□□ 0.05
CMTM3-205ENST00000562707 CCM2LQ9NUG4 571 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-205ENST00000562707 DNAJC11Q9NVH1 559 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 SPACA6W5XKT8 324 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 NF1P21359 2839 aa15.34■□□□□ 0.05
CMTM3-205ENST00000562707 MED13LQ71F56 2210 aa15.33■□□□□ 0.05
CMTM3-205ENST00000562707 ZFHX3Q15911 3703 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 MTORP42345 2549 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 TRGV5A0A0B4J1U4 118 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 HCN1O60741 890 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 CTAG2O75638 210 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 PEX19P40855 299 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 KIR2DL3P43628 341 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 KCNC1P48547 511 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 PPP2R2AP63151 447 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 FOXO1Q12778 655 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 FRG1Q14331 258 aaKnown RBP15.33■□□□□ 0.04
CMTM3-205ENST00000562707 MORF4L2Q15014 288 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 HIST2H2ACQ16777 129 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-205ENST00000562707 STEAP4Q687X5 459 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 HIST2H2AA3Q6FI13 130 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 VN1R5Q7Z5H4 357 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 WDR53Q7Z5U6 358 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-205ENST00000562707 TGIF2LYQ8IUE0 185 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 LIX1LQ8IVB5 337 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 ZZZ3Q8IYH5 903 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 ANKRD49Q8WVL7 239 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 PWWP2AQ96N64 755 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 RUNDC3BQ96NL0 473 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms