RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 PCDH7O60245 1069 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 CTSHP09668 335 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 CPEP16870 476 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 ATP5C1P36542 298 aaKnown RBP17.82■□□□□ 0.44
BBS4-204ENST00000562084 CLDN20P56880 219 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 RHOAP61586 193 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 HNRNPA0Q13151 305 aaKnown RBP17.82■□□□□ 0.44
BBS4-204ENST00000562084 CHIT1Q13231 466 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 GAB1Q13480 694 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 RIN1Q13671 783 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 PTPRRQ15256 657 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 RNF219Q5W0B1 726 aaPredicted RBP17.82■□□□□ 0.44
BBS4-204ENST00000562084 TRIM40Q6P9F5 258 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 TRIM48Q8IWZ4 208 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 CAMKK1Q8N5S9 505 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 OR4A15Q8NGL6 344 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 GTPBP3Q969Y2 492 aaKnown RBP17.82■□□□□ 0.44
BBS4-204ENST00000562084 PLD4Q96BZ4 506 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 KCTD7Q96MP8 289 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 KCND3Q9UK17 655 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 PRELID1Q9Y255 219 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.82■□□□□ 0.44
BBS4-204ENST00000562084 GABRR3A8MPY1 467 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 M0R129 80 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 PRAMEF12O95522 483 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 CD160O95971 181 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 CRATP43155 626 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.82■□□□□ 0.44
BBS4-204ENST00000562084 DGKKQ5KSL6 1271 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 C12orf73Q69YU5 71 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 ZNF770Q6IQ21 691 aaPredicted RBP17.82■□□□□ 0.44
BBS4-204ENST00000562084 PLA2G15Q8NCC3 412 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 OR8J1Q8NGP2 316 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 WDR20Q8TBZ3 569 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 ASB11Q8WXH4 323 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 BEX2Q9BXY8 128 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 UCK2Q9BZX2 261 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 TRIM45Q9H8W5 580 aaPredicted RBP17.82■□□□□ 0.44
BBS4-204ENST00000562084 NMNAT1Q9HAN9 279 aaPredicted RBP17.82■□□□□ 0.44
BBS4-204ENST00000562084 WDR70Q9NW82 654 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 ZDHHC3Q9NYG2 299 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 TEKT2Q9UIF3 430 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 MGAT4BQ9UQ53 548 aa17.82■□□□□ 0.44
BBS4-204ENST00000562084 IRGMA1A4Y4 181 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 F8W810 466 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 PITPNM1O00562 1244 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 GSTM1P09488 218 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 MYL12AP19105 171 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 POLR2CP19387 275 aaPredicted RBP17.81■□□□□ 0.44
BBS4-204ENST00000562084 IDSP22304 550 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 THPOP40225 353 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 MVDP53602 400 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 RRAS2P62070 204 aaPredicted RBP17.81■□□□□ 0.44
BBS4-204ENST00000562084 MRPL28Q13084 256 aaKnown RBP17.81■□□□□ 0.44
BBS4-204ENST00000562084 DOC2BQ14184 412 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 SPIN4Q56A73 249 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 HDDC2Q7Z4H3 204 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 TAGAPQ8N103 731 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 TRMT61AQ96FX7 289 aaKnown RBP17.81■□□□□ 0.44
BBS4-204ENST00000562084 SOSTQ9BQB4 213 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 MARVELD1Q9BSK0 173 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 ATP6V1HQ9UI12 483 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 TMPRSS11EQ9UL52 423 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 TMCC3Q9ULS5 477 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 DIMT1Q9UNQ2 313 aaKnown RBP17.81■□□□□ 0.44
BBS4-204ENST00000562084 ANGPT4Q9Y264 503 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 SPEF1Q9Y4P9 236 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 ASB4Q9Y574 426 aa17.81■□□□□ 0.44
BBS4-204ENST00000562084 A0A1W2PQ67 120 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 H0YIV9 168 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 SMAD6O43541 496 aaKnown RBP17.8■□□□□ 0.44
BBS4-204ENST00000562084 GASTP01350 101 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 OPN1SWP03999 348 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 IFNW1P05000 195 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 CLTBP09497 229 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 ALPIP09923 528 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 SLC2A2P11168 524 aaPredicted RBP17.8■□□□□ 0.44
BBS4-204ENST00000562084 UBL4AP11441 157 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 PRKACBP22694 351 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 CD52P31358 61 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 IRS1P35568 1242 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 RPL3P39023 403 aaKnown RBP17.8■□□□□ 0.44
BBS4-204ENST00000562084 MAPK8P45983 427 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 OR1E2P47887 323 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 IRF8Q02556 426 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 CHRNA6Q15825 494 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 CTXN3Q4LDR2 81 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 SLC25A30Q5SVS4 291 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 CASP12Q6UXS9 341 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 ZNF598Q86UK7 904 aaKnown RBP17.8■□□□□ 0.44
BBS4-204ENST00000562084 SIX5Q8N196 739 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 ATAD1Q8NBU5 361 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 HJURPQ8NCD3 748 aaPredicted RBP17.8■□□□□ 0.44
BBS4-204ENST00000562084 NELL2Q99435 816 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 ABCG8Q9H221 673 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 TBX21Q9UL17 535 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 RAB23Q9ULC3 237 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 SLC6A14Q9UN76 642 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 LINC00862A6NCI5 91 aa17.8■□□□□ 0.44
BBS4-204ENST00000562084 MGAT4DA6NG13 374 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms