RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ATG4BQ9Y4P1 393 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 SLC22A7Q9Y694 548 aa16.23■□□□□ 0.19
HDDC3-206ENST00000561036 MDC1Q14676 2089 aaKnown RBP16.22■□□□□ 0.19
HDDC3-206ENST00000561036 TLCD2A6NGC4 264 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 YKT6O15498 198 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 AIFM1O95831 613 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 BMP2P12643 396 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 ST6GAL1P15907 406 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 ALOX12P18054 663 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 FASP25445 335 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 NTSP30990 170 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 PPP1CAP62136 330 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 BNC1Q01954 994 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 RBBP4Q09028 425 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 NR1D2Q14995 579 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 FAM98BQ52LJ0 330 aaKnown RBP16.22■□□□□ 0.19
HDDC3-206ENST00000561036 IRGCQ6NXR0 463 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 SLC48A1Q6P1K1 146 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 FKBP9P1Q75LS8 142 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 RABEPKQ7Z6M1 372 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 SAMD14Q8IZD0 417 aaPredicted RBP16.22■□□□□ 0.19
HDDC3-206ENST00000561036 DNAJC22Q8N4W6 341 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 DTWD2Q8NBA8 298 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 EXOSC8Q96B26 276 aaKnown RBP16.22■□□□□ 0.19
HDDC3-206ENST00000561036 NECAB3Q96P71 396 aaPredicted RBP16.22■□□□□ 0.19
HDDC3-206ENST00000561036 CCDC3Q9BQI4 270 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 KLHL25Q9H0H3 589 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 EPS8L2Q9H6S3 715 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 MAGIXQ9H6Y5 334 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 LYRM4Q9HD34 91 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 SLAMF7Q9NQ25 335 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 GIMAP4Q9NUV9 329 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 DCAF13Q9NV06 445 aaKnown RBP16.22■□□□□ 0.19
HDDC3-206ENST00000561036 UTS2RQ9UKP6 389 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 CES1P1Q9UKY3 287 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 AURKCQ9UQB9 309 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 RNF215Q9Y6U7 377 aa16.22■□□□□ 0.19
HDDC3-206ENST00000561036 SPAG17Q6Q759 2223 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 SLC9B1P1A6NJY1 282 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 MYO1GB0I1T2 1018 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 RAP2AP10114 183 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 NR2F6P10588 404 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 GLB1P16278 677 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 PEX2P28328 305 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 PCGF2P35227 344 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 CHI3L1P36222 383 aaPredicted RBP16.21■□□□□ 0.19
HDDC3-206ENST00000561036 BUD31P41223 144 aaPredicted RBP16.21■□□□□ 0.19
HDDC3-206ENST00000561036 MVDP53602 400 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 SHBQ15464 509 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 ADRM1Q16186 407 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 NIPAL1Q6NVV3 410 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 PTOV1Q86YD1 416 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 MCATQ8IVS2 390 aaKnown RBP16.21■□□□□ 0.19
HDDC3-206ENST00000561036 SLC30A8Q8IWU4 369 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 ANKFN1Q8N957 763 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 C11orf65Q8NCR3 313 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 LRTOMTQ8WZ04 291 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 NCLNQ969V3 563 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 PPWD1Q96BP3 646 aaKnown RBP16.21■□□□□ 0.19
HDDC3-206ENST00000561036 NEURL3Q96EH8 262 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 BBS4Q96RK4 519 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 MAPKAP1Q9BPZ7 522 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 DPH2Q9BQC3 489 aaPredicted RBP16.21■□□□□ 0.19
HDDC3-206ENST00000561036 DUSP23Q9BVJ7 150 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 NPLQ9BXD5 320 aaPredicted RBP16.21■□□□□ 0.19
HDDC3-206ENST00000561036 TMEM38AQ9H6F2 299 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 CXorf36Q9H7Y0 433 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 IL21RQ9HBE5 538 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 AGPAT4Q9NRZ5 378 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 NLGN3Q9NZ94 848 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 KCMF1Q9P0J7 381 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 LRIT1Q9P2V4 623 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 FBXW2Q9UKT8 454 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 CNOT11Q9UKZ1 510 aaKnown RBP16.21■□□□□ 0.19
HDDC3-206ENST00000561036 ENTPD4Q9Y227 616 aa16.21■□□□□ 0.19
HDDC3-206ENST00000561036 TNRC6BQ9UPQ9 1833 aaKnown RBP16.21■□□□□ 0.19
HDDC3-206ENST00000561036 TP53BP1Q12888 1972 aaPredicted RBP16.2■□□□□ 0.18
HDDC3-206ENST00000561036 A0A1B0GTQ1 180 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 HRO43593 1189 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 PRAMEF10O60809 474 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 TNFRSF21O75509 655 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 TIPRLO75663 272 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 NTRK1P04629 796 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 GIMD1P0DJR0 217 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 ACADSP16219 412 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 EPHA8P29322 1005 aaPredicted RBP16.2■□□□□ 0.18
HDDC3-206ENST00000561036 TLX1P31314 330 aaPredicted RBP16.2■□□□□ 0.18
HDDC3-206ENST00000561036 SOAT1P35610 550 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 SOX11P35716 441 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 GPLD1P80108 840 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 TNFRSF17Q02223 184 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 CHRNB3Q05901 458 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 BNIP3Q12983 259 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 SRSF5Q13243 272 aaKnown RBP16.2■□□□□ 0.18
HDDC3-206ENST00000561036 TAF11Q15544 211 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 CEBPEQ15744 281 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.2■□□□□ 0.18
HDDC3-206ENST00000561036 GCNT6Q5T4J0 391 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 LPCAT4Q643R3 524 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 SAXO2Q658L1 398 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms