RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LYARQ9NX58 379 aaKnown RBP13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 VPS29Q9UBQ0 182 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 PCDHGA9Q9Y5G4 932 aaKnown RBP13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 NUP210LQ5VU65 1888 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 ZNF860A6NHJ4 632 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 C4orf51C9J302 202 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 MKRN2OSH3BPM6 223 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 PPP6CO00743 305 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 ATXN7O15265 892 aaPredicted RBP13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 ITM2AO43736 263 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 CHEK2O96017 543 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 FGF4P08620 206 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 TLX1P31314 330 aaPredicted RBP13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 ARRB2P32121 409 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 BUD31P41223 144 aaPredicted RBP13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 LIM2P55344 173 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 POLE2P56282 527 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 SNRPNP63162 240 aaKnown RBP13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 ATP1A4Q13733 1029 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 SPIN4Q56A73 249 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 ATP1A1-AS1Q5TC04 95 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 MFSD4BQ5TF39 518 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 KIRREL2Q6UWL6 708 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 RPS27LQ71UM5 84 aaKnown RBP13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 NDUFAF7Q7L592 441 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 UBE3DQ7Z6J8 389 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 OR11G2Q8NGC1 345 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 OR5T3Q8NGG3 340 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 TUBB6Q9BUF5 446 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 ATP13A2Q9NQ11 1180 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 PFDN4Q9NQP4 134 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 LANCL2Q9NS86 450 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 SCN3AQ9NY46 2000 aa13.17□□□□□ -0.3
PKNOX1-209ENST00000560448 NSG1A0A0A6YYJ2 146 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 A0A1B0GTL3 188 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 ARHGAP10A1A4S6 786 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 TMEM114B3SHH9 223 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 NPIPB8E9PQR5 432 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 MANBAO00462 879 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 PRMT3O60678 531 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 CEACAM4O75871 244 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 UBOX5O94941 541 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 PDYNP01213 254 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 TSPAN8P19075 237 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 CERS1P27544 350 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 SLC1A6P48664 564 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 NEK2P51955 445 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 TRA2BP62995 288 aaKnown RBP13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 RHAGQ02094 409 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 NSDHLQ15738 373 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 IRAK1BP1Q5VVH5 260 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 TRIM46Q7Z4K8 759 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 CUZD1Q86UP6 607 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 LAPTM4BQ86VI4 370 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 PPP1R14CQ8TAE6 165 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 EXTL1Q92935 676 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 SORT1Q99523 831 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 ZNF717Q9BY31 904 aaPredicted RBP13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 WDR41Q9HAD4 459 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 SIRT5Q9NXA8 310 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 KCMF1Q9P0J7 381 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 SLC12A4Q9UP95 1085 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 CCDC88CQ9P219 2028 aa13.16□□□□□ -0.3
PKNOX1-209ENST00000560448 IGHV1-45A0A0A0MS14 117 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 A0A0A6YYD5 115 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 ARGFXA6NJG6 315 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 CYR61O00622 381 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 UBFD1O14562 309 aaKnown RBP13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 LYPLA1O75608 230 aaPredicted RBP13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 BSGP35613 385 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 ARFIP2P53365 341 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 ABCE1P61221 599 aaKnown RBP13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 OLR1P78380 273 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 ACTN3Q08043 901 aaPredicted RBP13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 BNIP1Q12981 228 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 SLAMF1Q13291 335 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 RUNX2Q13950 521 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 SERTAD2Q14140 314 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 ABRAXAS2Q15018 415 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 EXT1Q16394 746 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 LINC00303Q3SY05 128 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 MRM1Q6IN84 353 aaKnown RBP13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 CYP20A1Q6UW02 462 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 ZNF793Q6ZN11 406 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 SHISA6Q6ZSJ9 500 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 CPEB2Q7Z5Q1 589 aaKnown RBP13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 GPR180Q86V85 440 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 CRLF3Q8IUI8 442 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 SCUBE1Q8IWY4 988 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 PRSS58Q8IYP2 241 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 CLYBLQ8N0X4 340 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 TANKQ92844 425 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 LPAR4Q99677 370 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 TMEM120AQ9BXJ8 343 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 SHCBP1LQ9BZQ2 653 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 ZNF700Q9H0M5 742 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 DCTN4Q9UJW0 460 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms