RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CBFA2T3O75081 653 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 MPC1LP0DKB6 136 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 CKMT2P17540 419 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 KCNC4Q03721 635 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 TMEM35AQ53FP2 167 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 SLC35F1Q5T1Q4 408 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 RAET1LQ5VY80 246 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 ALDH16A1Q8IZ83 802 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 PLD6Q8N2A8 252 aaKnown RBP12.94□□□□□ -0.34
TRAF3-208ENST00000560371 TMCO6Q96DC7 493 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 SCRN2Q96FV2 425 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 RMI1Q9H9A7 625 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 ECM29Q5VYK3 1845 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 PHIPQ8WWQ0 1821 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 C2orf92A0A1B0GVN3 265 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 PLD2O14939 933 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 CXCL12P48061 93 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 PLCXD2Q0VAA5 305 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 OR5P2Q8WZ92 322 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF395Q9H8N7 513 aaPredicted RBP12.94□□□□□ -0.34
TRAF3-208ENST00000560371 FBRSL1Q9HCM7 1045 aaKnown RBP12.94□□□□□ -0.34
TRAF3-208ENST00000560371 PAK6Q9NQU5 681 aaPredicted RBP12.94□□□□□ -0.34
TRAF3-208ENST00000560371 LIPT1Q9Y234 373 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 SOX14O95416 240 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 PDYNP01213 254 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 TMEM203Q969S6 136 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 LRCH3Q96II8 777 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 RPF2Q9H7B2 306 aaKnown RBP12.94□□□□□ -0.34
TRAF3-208ENST00000560371 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 H3BSH0 61 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF806P0C7X5 589 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 HSD3B1P14060 373 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 CD36P16671 472 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 FUT4P22083 530 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 CDH11P55287 796 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 PMS2P3Q13401 168 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 SPATC1Q76KD6 591 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 MRPL43Q8N983 215 aaKnown RBP12.93□□□□□ -0.34
TRAF3-208ENST00000560371 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.93□□□□□ -0.345e-6■■■■□ 21.5
TRAF3-208ENST00000560371 TMBIM1Q969X1 311 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 DFNA5O60443 496 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 SOX30O94993 753 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 HK1P19367 917 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF84P51523 738 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 USP43Q70EL4 1123 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF615Q8N8J6 731 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF548Q8NEK5 533 aaPredicted RBP12.93□□□□□ -0.34
TRAF3-208ENST00000560371 SLC22A8Q8TCC7 542 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 FGF13Q92913 245 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 BORCS8Q96FH0 119 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 IL17FQ96PD4 163 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 CYTH4Q9UIA0 394 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 LOC100130705A0A1B0GUX0 176 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 A0A1W2PPL8 197 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 XRCC1P18887 633 aaPredicted RBP12.93□□□□□ -0.34
TRAF3-208ENST00000560371 ODF4Q2M2E3 257 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 RBM48Q5RL73 367 aaKnown RBP12.93□□□□□ -0.34
TRAF3-208ENST00000560371 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 NCEH1Q6PIU2 408 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF611Q8N823 705 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 DNMT3AQ9Y6K1 912 aaPredicted RBP12.93□□□□□ -0.34
TRAF3-208ENST00000560371 HBQ1P09105 142 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 BPIP17213 487 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 PTNP21246 168 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 TIA1P31483 386 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAF3-208ENST00000560371 C6orf136Q5SQH8 315 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 IGDCC3Q8IVU1 814 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 ZC3H3Q8IXZ2 948 aaKnown RBP12.93□□□□□ -0.34
TRAF3-208ENST00000560371 RAB2BQ8WUD1 216 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 CPEB1Q9BZB8 566 aaKnown RBP12.93□□□□□ -0.34
TRAF3-208ENST00000560371 TEX13CA0A0J9YWL9 993 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 A0A1B0GVT2 93 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 SEMA3DO95025 777 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 P04436 131 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 LRRTM3Q86VH5 581 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 HSH2DQ96JZ2 352 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 HHIPQ96QV1 700 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 TMED9Q9BVK6 235 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 FKBP14Q9NWM8 211 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 GXYLT1Q4G148 440 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 LRIF1Q5T3J3 769 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 UNQ6126/PRO20091Q6UXV3 157 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF761Q86XN6 746 aaPredicted RBP12.93□□□□□ -0.34
TRAF3-208ENST00000560371 PEX11GQ96HA9 241 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 OSBPL7Q9BZF2 842 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 SLC7A8Q9UHI5 535 aa12.93□□□□□ -0.34
TRAF3-208ENST00000560371 A0A1B0GVI7 797 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 C1orf226A1L170 272 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF821O75541 412 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-208ENST00000560371 CDKL1Q00532 357 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 TCTE1Q5JU00 501 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 FAM69BQ5VUD6 431 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 STON2Q8WXE9 905 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 FCRL3Q96P31 734 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-208ENST00000560371 MALT1Q9UDY8 824 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 KDM4BO94953 1096 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 RLN2P04090 185 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 OCLNQ16625 522 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 SPIN3Q5JUX0 258 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms