RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ABCC4O15439 1325 aa2.06□□□□□ -2.08
GABPB1-209ENST00000559100 STK36Q9NRP7 1315 aa2.06□□□□□ -2.08
GABPB1-209ENST00000559100 EVPLQ92817 2033 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 A0A087WUV0 522 aaPredicted RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 A0A087WZ39 114 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ATP6AP2A0A1C7CYW4 349 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 MTMR11A4FU01 709 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 YJEFN3A6XGL0 299 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF195O14628 629 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 KLF11O14901 512 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 MAPK13O15264 365 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 RIPK2O43353 540 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 BUB3O43684 328 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 FGF17O60258 216 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 LRP3O75074 770 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 SAP30O75446 220 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ANXA9O76027 345 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CPNE6O95741 557 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 TSHBP01222 138 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 VTNP04004 478 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CA3P07451 260 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 APRTP07741 180 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 HMBSP08397 361 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 FRMD6-AS1P0C7T7 363 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ZCCHC18P0CG32 403 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 SNHG28P0DPA3 235 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CDK4P11802 303 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 TSPAN8P19075 237 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CYP3A5P20815 502 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ATP6V1C1P21283 382 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 GIFP27352 417 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 PRDX2P32119 198 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 SOX6P35712 828 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 LIMK2P53671 638 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ABCE1P61221 599 aaKnown RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 PMP22Q01453 160 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 GABPAQ06546 454 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 GPR50Q13585 617 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 HNRNPDQ14103 355 aaKnown RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 EXOSC7Q15024 291 aaKnown RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ZKSCAN8Q15776 578 aaPredicted RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 C3AR1Q16581 482 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ACCSLQ4AC99 568 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 XKR6Q5GH73 641 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 WDR38Q5JTN6 314 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 C9orf50Q5SZB4 431 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 LIPJQ5W064 366 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 C9orf57Q5W0N0 161 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 AWAT2Q6E213 333 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 WBP2NLQ6ICG8 309 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CAPN13Q6MZZ7 669 aaPredicted RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CDC42EP5Q6NZY7 148 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 SPSB3Q6PJ21 355 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CASC1Q6TDU7 716 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 PRSS57Q6UWY2 283 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 FOXL2NBQ6ZUU3 175 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CYP4V2Q6ZWL3 525 aaPredicted RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 TRMT1LQ7Z2T5 733 aaKnown RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ADGRD2Q7Z7M1 963 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 PIGZQ86VD9 579 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CENPLQ8N0S6 344 aaPredicted RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 NAGSQ8N159 534 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 PARP8Q8N3A8 854 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CERS5Q8N5B7 392 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 MLKLQ8NB16 471 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 GMCL1P1Q8NEA9 526 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 FAM71CQ8NEG0 241 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 OR10T2Q8NGX3 314 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 GIPC3Q8TF64 312 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 APOBEC4Q8WW27 367 aaKnown RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 HPSE2Q8WWQ2 592 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 TCP11Q8WWU5 503 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 TMEM45BQ96B21 275 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CCDC51Q96ER9 411 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 DTNBP1Q96EV8 351 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ALG14Q96F25 216 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 RBM18Q96H35 190 aaKnown RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 PCED1BQ96HM7 432 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 DEFB118Q96PH6 123 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ERGIC2Q96RQ1 377 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 S1PR3Q99500 378 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 CBWD1Q9BRT8 395 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 FICDQ9BVA6 458 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 GSDMCQ9BYG8 508 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 EGLN1Q9GZT9 426 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 THAP2Q9H0W7 228 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 HIPK2Q9H2X6 1198 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 KCNK13Q9HB14 408 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 GDF3Q9NR23 364 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 MED17Q9NVC6 651 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 TEX10Q9NXF1 929 aaPredicted RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 GDAP2Q9NXN4 497 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF624Q9P2J8 865 aaPredicted RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 XPO7Q9UIA9 1087 aaKnown RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 DIMT1Q9UNQ2 313 aaKnown RBP2.05□□□□□ -2.08
GABPB1-209ENST00000559100 WDR37Q9Y2I8 494 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 MFHAS1Q9Y4C4 1052 aa2.05□□□□□ -2.08
GABPB1-209ENST00000559100 ATG4BQ9Y4P1 393 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms