RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PDGFAP04085 211 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 BPGMP07738 259 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 HSD3B1P14060 373 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 HSD3B2P26439 372 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 ETV4P43268 484 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 FOXA1P55317 472 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 HSD17B7P56937 341 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 SOX8P57073 446 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 CSTF3Q12996 717 aaKnown RBP11.6□□□□□ -0.55
SMAD3-205ENST00000558428 VWA5B1Q5TIE3 1220 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 PAPD4Q6PIY7 484 aaKnown RBP11.6□□□□□ -0.55
SMAD3-205ENST00000558428 ZCCHC23Q6ZST2 131 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 ASB18Q6ZVZ8 466 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 PAGE2Q7Z2X7 111 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 CLNKQ7Z7G1 428 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 GPR180Q86V85 440 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 SCUBE1Q8IWY4 988 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 KBTBD2Q8IY47 623 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 METTL4Q8N3J2 472 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 CNDP1Q96KN2 507 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 LPAR4Q99677 370 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 WDR77Q9BQA1 342 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-205ENST00000558428 TRMOQ9BU70 441 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 LHPPQ9H008 270 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 ZNF552Q9H707 407 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-205ENST00000558428 MLXIPLQ9NP71 852 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 NMRK1Q9NWW6 199 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 LYARQ9NX58 379 aaKnown RBP11.6□□□□□ -0.55
SMAD3-205ENST00000558428 MS4A12Q9NXJ0 267 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 PHF11Q9UIL8 331 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 ZNF451Q9Y4E5 1061 aa11.6□□□□□ -0.55
SMAD3-205ENST00000558428 TCRBV16S1A1N1A0A5B0 115 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 ARHGAP10A1A4S6 786 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 BLACEA4D250 179 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 A8MUA0 341 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 TM9SF1O15321 606 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 TMPRSS11DO60235 418 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 NPHS1O60500 1241 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 C1QL1O75973 258 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 ALPPP05187 535 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 SERPINA7P05543 415 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 KLK1P06870 262 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 UQCRHP07919 91 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 CELA2AP08217 269 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 FAM58BPP0C7Q3 252 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 PRR35P0CG20 571 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 ICAM2P13598 275 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 TLX1P31314 330 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-205ENST00000558428 BUD31P41223 144 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-205ENST00000558428 HNRNPH2P55795 449 aaKnown RBP11.59□□□□□ -0.55
SMAD3-205ENST00000558428 AP2B1P63010 937 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 TNFRSF17Q02223 184 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 ZNF33BQ06732 778 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 EXT1Q16394 746 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 BTBD16Q32M84 506 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 MRM1Q6IN84 353 aaKnown RBP11.59□□□□□ -0.55
SMAD3-205ENST00000558428 SCIMPQ6UWF3 145 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 RIPOR1Q6ZS17 1223 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 COMMD6Q7Z4G1 85 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 CUZD1Q86UP6 607 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 PTRH1Q86Y79 214 aaKnown RBP11.59□□□□□ -0.55
SMAD3-205ENST00000558428 NUDCD3Q8IVD9 361 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 ZNF843Q8N446 348 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 AMER2Q8N7J2 671 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 GBP7Q8N8V2 638 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-205ENST00000558428 PKNOX2Q96KN3 472 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 IMMP1LQ96LU5 166 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 SMAD5Q99717 465 aaKnown RBP11.59□□□□□ -0.55
SMAD3-205ENST00000558428 ACPTQ9BZG2 426 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 TMBIM4Q9HC24 238 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 TNFRSF12AQ9NP84 129 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 VPS29Q9UBQ0 182 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 ATG4BQ9Y4P1 393 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 PCDHGB7Q9Y5F8 929 aa11.59□□□□□ -0.55
SMAD3-205ENST00000558428 MYOCOSA0A1B0GUC4 107 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 WDR91A4D1P6 747 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 SYNDIG1LA6NDD5 238 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 TGFBR3LH3BV60 316 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 PROM1O43490 865 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 CTNSO60931 367 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 LDB3O75112 727 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 ZWINTO95229 277 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 UROSP10746 265 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 ITGAMP11215 1152 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 CHN1P15882 459 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 H2AFXP16104 143 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-205ENST00000558428 TPP2P29144 1249 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-205ENST00000558428 SERPINB3P29508 390 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 SERPINB4P48594 390 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 HMGCS1Q01581 520 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 GALNT1Q10472 559 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-205ENST00000558428 TBL3Q12788 808 aaKnown RBP11.58□□□□□ -0.56
SMAD3-205ENST00000558428 STX4Q12846 297 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 CCNYL2Q5T2Q4 361 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 AGAP7PQ5VUJ5 663 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 C18orf63Q68DL7 685 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 PLAG1Q6DJT9 500 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 CLEC6AQ6EIG7 209 aa11.58□□□□□ -0.56
SMAD3-205ENST00000558428 C1orf52Q8N6N3 182 aaKnown RBP11.58□□□□□ -0.56
SMAD3-205ENST00000558428 SIRT6Q8N6T7 355 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms