RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SPDEFO95238 335 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 RAB3BP20337 219 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 GSTM3P21266 225 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 GLP1RP43220 463 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 MMP14P50281 582 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 PTP4A2Q12974 167 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 ZNF792Q3KQV3 632 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 ALG10BQ5I7T1 473 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 KLHL15Q96M94 604 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
SPG11-210ENST00000558319 SYT4Q9H2B2 425 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 FAIMQ9NVQ4 179 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 OR6C6A6NF89 314 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 TMBIM6P55061 237 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 PON3Q15166 354 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 SGCAQ16586 387 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 ZNF550Q7Z398 422 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 GOLGA7Q7Z5G4 137 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 PDZD9Q8IXQ8 264 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 SLC15A4Q8N697 577 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 PLEKHO2Q8TD55 490 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 CD180Q99467 661 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 C17orf62Q9BQA9 187 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 ORAI3Q9BRQ5 295 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 PIGVQ9NUD9 493 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 TMEM9Q9P0T7 183 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 SRRDQ9UH36 339 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 HEBP2Q9Y5Z4 205 aa13.45□□□□□ -0.26
SPG11-210ENST00000558319 HTR3EA5X5Y0 456 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 FMO6PO60774 539 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 CNOT4O95628 575 aaKnown RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 MT-ND5P03915 603 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 PORP16435 677 aaPredicted RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 FAM214AQ32MH5 1076 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 FBXL22Q6P050 247 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 TPSD1Q9BZJ3 242 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 A6NCN8 305 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 PEX12O00623 359 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 FPR1P21462 350 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 L1CAMP32004 1257 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 BLKP51451 505 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 POU4F3Q15319 338 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 CYBRD1Q53TN4 286 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 ACBD4Q8NC06 268 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 RGMAQ96B86 450 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 CCM2Q9BSQ5 444 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 NPLQ9BXD5 320 aaPredicted RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 C1orf21Q9H246 121 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 MINDY3Q9H8M7 445 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 WDR45Q9Y484 360 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 DNMT3AQ9Y6K1 912 aaPredicted RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 H7C417 338 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 SEC14L5O43304 696 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 TXNL1O43396 289 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 OIP5O43482 229 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 RCBTB2O95199 551 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 BMP1P13497 986 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 ACVR1BP36896 505 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 ARSFP54793 590 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 FKBP1BP68106 108 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 RNF130Q86XS8 419 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 PRR18Q8N4B5 295 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 ZNF527Q8NB42 609 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 OR4K1Q8NGD4 311 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 SNIP1Q8TAD8 396 aaKnown RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 RBBP9O75884 186 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 PAK4O96013 591 aaPredicted RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 PET100P0DJ07 73 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 HCAR3P49019 387 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 CHRFAM7AQ494W8 412 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 SPANXN4Q5MJ08 99 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 CEACAM19Q7Z692 300 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 LHFPL3Q86UP9 236 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 DNAJB8Q8NHS0 232 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 ZNF420Q8TAQ5 688 aaPredicted RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 DDX1Q92499 740 aaKnown RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 PCDHB14Q9Y5E9 798 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 KLHL33A6NCF5 533 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 ALDH3B1P43353 468 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 ZNF529Q6P280 563 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 LAS2Q8IYD9 372 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 PM20D2Q8IYS1 436 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 FANK1Q8TC84 345 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 NECAB3Q96P71 396 aaPredicted RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 OR1F2PQ96R84 312 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 TMEM45AQ9NWC5 275 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 ZIM2Q9NZV7 527 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 NUFIP1Q9UHK0 495 aaKnown RBP13.44□□□□□ -0.26
SPG11-210ENST00000558319 HS3ST4Q9Y661 456 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 AGLP35573 1532 aa13.44□□□□□ -0.26
SPG11-210ENST00000558319 ZNF705GA8MUZ8 300 aaPredicted RBP13.43□□□□□ -0.26
SPG11-210ENST00000558319 SLC7A4O43246 635 aa13.43□□□□□ -0.26
SPG11-210ENST00000558319 RAB4AP20338 218 aa13.43□□□□□ -0.26
SPG11-210ENST00000558319 ENDOUP21128 410 aaKnown RBP13.43□□□□□ -0.26
SPG11-210ENST00000558319 PXNP49023 591 aaPredicted RBP13.43□□□□□ -0.26
SPG11-210ENST00000558319 GNMTQ14749 295 aa13.43□□□□□ -0.26
SPG11-210ENST00000558319 MSS51Q4VC12 460 aa13.43□□□□□ -0.26
SPG11-210ENST00000558319 ZNF584Q8IVC4 421 aa13.43□□□□□ -0.26
SPG11-210ENST00000558319 TOR1AIP2Q8NFQ8 470 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms