RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 CYP17A1P05093 508 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 ARAFP10398 606 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 PTPN2P17706 415 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 VIPR2P41587 438 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 PPP5CP53041 499 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 PCDH1Q08174 1060 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 STEAP3Q658P3 488 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 HIST2H2AA3Q6FI13 130 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 TMIGD1Q6UXZ0 262 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 UTS2BQ765I0 119 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 LYSMD2Q8IV50 215 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 GEMIN6Q8WXD5 167 aaKnown RBP16.89■□□□□ 0.29
XRCC3-218ENST00000557439 NUS1Q96E22 293 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 CFHR5Q9BXR6 569 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 PLCXD1Q9NUJ7 323 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 TAC3Q9UHF0 121 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 MAFFQ9ULX9 164 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 LTBP2Q14767 1821 aa16.89■□□□□ 0.29
XRCC3-218ENST00000557439 OTOL1A6NHN0 477 aaPredicted RBP16.88■□□□□ 0.29
XRCC3-218ENST00000557439 FOXE1O00358 373 aaPredicted RBP16.88■□□□□ 0.29
XRCC3-218ENST00000557439 PLPP1O14494 284 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 LZTS3O60299 673 aaPredicted RBP16.88■□□□□ 0.29
XRCC3-218ENST00000557439 CCNB2O95067 398 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 CLTBP09497 229 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 PCSK2P16519 638 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 RGS6P49758 472 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 PCBP3P57721 371 aaKnown RBP16.88■□□□□ 0.29
XRCC3-218ENST00000557439 DSTNP60981 165 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 SEC23BQ15437 767 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 SZRD1Q7Z422 152 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 TAGAPQ8N103 731 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 RSPRY1Q96DX4 576 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 TOX2Q96NM4 488 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 TMEM38AQ9H6F2 299 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 THSD1Q9NS62 852 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 NFKBIL1Q9UBC1 381 aaPredicted RBP16.88■□□□□ 0.29
XRCC3-218ENST00000557439 SLC23A2Q9UGH3 650 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 IFT52Q9Y366 437 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 HCN4Q9Y3Q4 1203 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 CXorf51AA0A1B0GTR3 108 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 KDM1AO60341 852 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 TPST2O60704 377 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 CKMT1AP12532 417 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 CBLP22681 906 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 LIMS1P48059 325 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 TSTQ16762 297 aaKnown RBP16.88■□□□□ 0.29
XRCC3-218ENST00000557439 PRAMEF14Q5SWL7 426 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 PRAMEF13Q5VWM6 474 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 PTCHD4Q6ZW05 846 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 CYP4Z2PQ8N1L4 340 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 AMER3Q8N944 861 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 ANKRD53Q8N9V6 530 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 GPR32P1Q8NGA4 272 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 SLC38A5Q8WUX1 472 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 PAIP2BQ9ULR5 123 aaKnown RBP16.88■□□□□ 0.29
XRCC3-218ENST00000557439 ENPP4Q9Y6X5 453 aa16.88■□□□□ 0.29
XRCC3-218ENST00000557439 RPLP0P05388 317 aaKnown RBP16.87■□□□□ 0.29
XRCC3-218ENST00000557439 CISD3P0C7P0 127 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 LSM11P83369 360 aaKnown RBP eCLIP16.87■□□□□ 0.29
XRCC3-218ENST00000557439 ARHGAP15Q53QZ3 475 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 CRB2Q5IJ48 1285 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 TPRG1LQ5T0D9 272 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 POC5Q8NA72 575 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 OR4D11Q8NGI4 311 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 FCGR1BQ92637 280 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 EXOSC8Q96B26 276 aaKnown RBP16.87■□□□□ 0.29
XRCC3-218ENST00000557439 CXorf40BQ96DE9 158 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 COL21A1Q96P44 957 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 KLHL25Q9H0H3 589 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 DNAJC27Q9NZQ0 273 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 DKK3Q9UBP4 350 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 AGAP5A6NIR3 686 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 ZW10O43264 779 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 SH3BP5O60239 455 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 UPK1BO75841 260 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 SLC9B2Q86UD5 537 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 HEATR4Q86WZ0 1026 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 LACC1Q8IV20 430 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 FAM20CQ8IXL6 584 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 KIAA1958Q8N8K9 716 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 WDR34Q96EX3 536 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 TMEM19Q96HH6 336 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 KCNS3Q9BQ31 491 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 CLEC2DQ9UHP7 191 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 ANGPT4Q9Y264 503 aa16.87■□□□□ 0.29
XRCC3-218ENST00000557439 RBMX2Q9Y388 322 aaKnown RBP16.87■□□□□ 0.29
XRCC3-218ENST00000557439 MRPS14O60783 128 aaKnown RBP16.86■□□□□ 0.29
XRCC3-218ENST00000557439 PAPLNO95428 1278 aa16.86■□□□□ 0.29
XRCC3-218ENST00000557439 IFNW1P05000 195 aa16.86■□□□□ 0.29
XRCC3-218ENST00000557439 ACADLP28330 430 aa16.86■□□□□ 0.29
XRCC3-218ENST00000557439 ST8SIA6P61647 398 aa16.86■□□□□ 0.29
XRCC3-218ENST00000557439 CSNK2BP67870 215 aa16.86■□□□□ 0.29
XRCC3-218ENST00000557439 RBBP4Q09028 425 aa16.86■□□□□ 0.29
XRCC3-218ENST00000557439 LRRC26Q2I0M4 334 aa16.86■□□□□ 0.29
XRCC3-218ENST00000557439 ZNF630Q2M218 657 aaPredicted RBP16.86■□□□□ 0.29
XRCC3-218ENST00000557439 DEF8Q6ZN54 512 aa16.86■□□□□ 0.29
XRCC3-218ENST00000557439 COMTD1Q86VU5 262 aa16.86■□□□□ 0.29
XRCC3-218ENST00000557439 MEX3DQ86XN8 651 aaKnown RBP16.86■□□□□ 0.29
XRCC3-218ENST00000557439 WDR36Q8NI36 951 aaKnown RBP16.86■□□□□ 0.29
XRCC3-218ENST00000557439 CTPS2Q9NRF8 586 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms