RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 DUSP28Q4G0W2 176 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 DCAF6Q58WW2 860 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 TECRLQ5HYJ1 363 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 MANEAQ5SRI9 462 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 C6orf10Q5SRN2 563 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PRAMEF19Q5SWL8 479 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ASPHD1Q5U4P2 390 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ZNF773Q6PK81 442 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ALKAL1Q6UXT8 129 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 NCCRP1Q6ZVX7 275 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SYT13Q7L8C5 426 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 EFL1Q7Z2Z2 1120 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 GPR142Q7Z601 462 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CUZD1Q86UP6 607 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PIM3Q86V86 326 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 LRRTM4Q86VH4 590 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 LRRC49Q8IUZ0 686 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PYROXD2Q8N2H3 581 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SFRP1Q8N474 314 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CBR4Q8N4T8 237 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 TMEM199Q8N511 208 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PCDH20Q8N6Y1 951 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SNX31Q8N9S9 440 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PAPD5Q8NDF8 572 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 TRPV3Q8NET8 790 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 OR6J1Q8NGC5 347 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 HEXDCQ8WVB3 486 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CANT1Q8WVQ1 401 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 S100ZQ8WXG8 99 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 HERVK_113Q902F9 699 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 KCNJ9Q92806 393 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 POP5Q969H6 163 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SLC25A28Q96A46 364 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 C18orf25Q96B23 403 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SLCO4A1Q96BD0 722 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 TMIGD2Q96BF3 282 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 NXNL1Q96CM4 212 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 L3HYPDHQ96EM0 354 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PGAP3Q96FM1 320 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ELMO2Q96JJ3 720 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 MARK4Q96L34 752 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PPP1R36Q96LQ0 422 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 COG8Q96MW5 612 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 RDH12Q96NR8 316 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 HNRNPABQ99729 332 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SLC29A1Q99808 456 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 GPATCH1Q9BRR8 931 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 MLPHQ9BV36 600 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 TRIM62Q9BVG3 475 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 NPLQ9BXD5 320 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 HDHD5Q9BXW7 423 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ARHGAP39Q9C0H5 1083 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CLPBQ9H078 707 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 RPF2Q9H7B2 306 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 NOL11Q9H8H0 719 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 GPN2Q9H9Y4 310 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 POLR1BQ9H9Y6 1135 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ENTPD7Q9NQZ7 604 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 CHRAC1Q9NRG0 131 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 TBC1D13Q9NVG8 400 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ATAD3AQ9NVI7 634 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SMOXQ9NWM0 555 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 GDAP2Q9NXN4 497 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ARL15Q9NXU5 204 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SMPD3Q9NY59 655 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 ABCD2Q9UBJ2 740 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 TUBGCP4Q9UGJ1 667 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 SLC25A13Q9UJS0 675 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 BAG5Q9UL15 447 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 UBQLN1Q9UMX0 589 aaKnown RBP4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PCDHGB4Q9UN71 923 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 MFHAS1Q9Y4C4 1052 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 PCDHGB5Q9Y5G0 923 aa4.53□□□□□ -1.68
ATXN3-246ENST00000557030 RALGAPA2Q2PPJ7 1873 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 ZNF236Q9UL36 1845 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 A0A1B0GVC2 190 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 MBLAC1A4D2B0 266 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-246ENST00000557030 A8MT66 165 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 MCIDASD6RGH6 385 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 GOLGA8TH3BQL2 631 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 UBXN8O00124 270 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 HAS3O00219 553 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 MAGEB3O15480 346 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 CACNG3O60359 315 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 HUS1O60921 280 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 CLPXO76031 633 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 SUPT7LO94864 414 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 ZBTB11O95625 1053 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-246ENST00000557030 HPRP00739 348 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 LDLRP01130 860 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 SMIM10L2AP0DMW4 78 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 SMIM10L2BP0DMW5 78 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 LYL1P12980 280 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 GFAPP14136 432 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 DARSP14868 501 aaKnown RBP4.52□□□□□ -1.69
ATXN3-246ENST00000557030 CKMT2P17540 419 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 UGT1A6P19224 532 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 IMPDH1P20839 514 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 ATP6V1B2P21281 511 aa4.52□□□□□ -1.69
ATXN3-246ENST00000557030 SAT1P21673 171 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms