RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 PRKCEQ02156 737 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 ARL16Q0P5N6 197 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
PRPF39-210ENST00000556718 HEPACAMQ14CZ8 416 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 STPG1Q5TH74 334 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 PLPP4Q5VZY2 271 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 LEKR1Q6ZMV7 388 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 CDHR3Q6ZTQ4 885 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 CHMP1BQ7LBR1 199 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 C5orf24Q7Z6I8 188 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 DCUN1D3Q8IWE4 304 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 ZC3H3Q8IXZ2 948 aaKnown RBP3.8□□□□□ -1.8
PRPF39-210ENST00000556718 SLC43A2Q8N370 569 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 RAB42Q8N4Z0 105 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 ZBTB44Q8NCP5 570 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 CCDC197Q8NCU1 140 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 OR10V1Q8NGI7 309 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 OR6M1Q8NGM8 313 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 ZNRF4Q8WWF5 429 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 SLC35C1Q96A29 364 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 SENP5Q96HI0 755 aaPredicted RBP3.8□□□□□ -1.8
PRPF39-210ENST00000556718 NECTIN4Q96NY8 510 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 COQ7Q99807 217 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 FUNDC2Q9BWH2 189 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 TMEM231Q9H6L2 316 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 LIN28AQ9H9Z2 209 aaKnown RBP3.8□□□□□ -1.8
PRPF39-210ENST00000556718 S100A14Q9HCY8 104 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 UBE2TQ9NPD8 197 aaPredicted RBP3.8□□□□□ -1.8
PRPF39-210ENST00000556718 DDX28Q9NUL7 540 aaKnown RBP3.8□□□□□ -1.8
PRPF39-210ENST00000556718 VPS54Q9P1Q0 977 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 ERVK-18Q9QC07 812 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 CLIP2Q9UDT6 1046 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 MRTO4Q9UKD2 239 aaKnown RBP3.8□□□□□ -1.8
PRPF39-210ENST00000556718 PILRAQ9UKJ1 303 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 ATP6V0A2Q9Y487 856 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 SMCHD1A6NHR9 2005 aa3.8□□□□□ -1.8
PRPF39-210ENST00000556718 SNED1Q8TER0 1413 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 FAM205AQ6ZU69 1335 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 IGHV4-4A0A075B6R2 117 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 FAM72CH0Y354 149 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 PDGFBP01127 241 aaPredicted RBP3.79□□□□□ -1.8
PRPF39-210ENST00000556718 IFNB1P01574 187 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 LYNP07948 512 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 HIST1H2AGP0C0S8 130 aaPredicted RBP3.79□□□□□ -1.8
PRPF39-210ENST00000556718 FAM157CP0CG43 387 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 TPBGLP0DKB5 382 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 DNAJB1P25685 340 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 GJB2P29033 226 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 CCR4P51679 360 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 TKTL1P51854 596 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 IRX3P78415 501 aaPredicted RBP3.79□□□□□ -1.8
PRPF39-210ENST00000556718 HSPA14Q0VDF9 509 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 NME3Q13232 169 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 SCGB2A2Q13296 93 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 FAM106AQ4KMX7 169 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 EPC2Q52LR7 807 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 GPAT3Q53EU6 434 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 MPPE1Q53F39 396 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 DDI2Q5TDH0 399 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 FAM72AQ5TYM5 149 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 IL23RQ5VWK5 629 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 FAM72DQ6L9T8 149 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 SLC25A47Q6Q0C1 308 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 SYVN1Q86TM6 617 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 FAM72BQ86X60 149 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.79□□□□□ -1.8
PRPF39-210ENST00000556718 ZNF843Q8N446 348 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 TMEM178AQ8NBL3 297 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 OR56B1Q8NGI3 324 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 OR2T11Q8NH01 316 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 FCGR1BQ92637 280 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 HIST1H2ACQ93077 130 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 RAB39BQ96DA2 213 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 CXorf58Q96LI9 332 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 LURAP1Q96LR2 239 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 GPR137Q96N19 417 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 TSGA13Q96PP4 275 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 TAAR6Q96RI8 345 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 ASCL2Q99929 193 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 NUSAP1Q9BXS6 441 aaKnown RBP3.79□□□□□ -1.8
PRPF39-210ENST00000556718 MMP28Q9H239 520 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 DPEP3Q9H4B8 488 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 ZNF665Q9H7R5 613 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 HPS4Q9NQG7 708 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 MAN2C1Q9NTJ4 1040 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 SOHLH2Q9NX45 425 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 ANKMY1Q9P2S6 941 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 PLCL2Q9UPR0 1127 aa3.79□□□□□ -1.8
PRPF39-210ENST00000556718 CEP162Q5TB80 1403 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 ZBED9Q6R2W3 1325 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 hCG_38984A0A1B0GV85 526 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 IQCMA0A1B0GVH7 501 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 SLCO1B7G3V0H7 640 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 BLOC1S5-TXNDC5H3BN57 136 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 K7EPI3 171 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 MLNRO43193 412 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 ECE2O60344 883 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 SMPD2O60906 423 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 SCGB2A1O75556 95 aa3.78□□□□□ -1.8
PRPF39-210ENST00000556718 AP2A2O94973 939 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms