RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 RAPSNQ13702 412 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 MRM1Q6IN84 353 aaKnown RBP23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 GPR180Q86V85 440 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 NUDT13Q86X67 352 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 KBTBD2Q8IY47 623 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 METTL4Q8N3J2 472 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 SREK1Q8WXA9 508 aaKnown RBP23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 SMAD5Q99717 465 aaKnown RBP23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 LHPPQ9H008 270 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 ARGLU1Q9NWB6 273 aaPredicted RBP23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 LYARQ9NX58 379 aaKnown RBP23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 MS4A12Q9NXJ0 267 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 PHF11Q9UIL8 331 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 ADAM29Q9UKF5 820 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 PCDHGB7Q9Y5F8 929 aa23.07■■□□□ 1.28
SDR39U1-221ENST00000556707 BLACEA4D250 179 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 TMPRSS11DO60235 418 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 NPHS1O60500 1241 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 ICAM2P13598 275 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 NR1D1P20393 614 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 CPN2P22792 545 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 FOXA1P55317 472 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 HNRNPH2P55795 449 aaKnown RBP23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 ACTN3Q08043 901 aaPredicted RBP23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 SLC13A2Q13183 592 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 VWA5B1Q5TIE3 1220 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 IRAK1BP1Q5VVH5 260 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 CYP20A1Q6UW02 462 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 RIPOR1Q6ZS17 1223 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 PAGE2Q7Z2X7 111 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 EFCAB3Q8N7B9 438 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 GBP7Q8N8V2 638 aaPredicted RBP23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 THOC3Q96J01 351 aaKnown RBP23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 LPAR4Q99677 370 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 SHCBP1LQ9BZQ2 653 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 TMBIM4Q9HC24 238 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 TNFRSF12AQ9NP84 129 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 VPS29Q9UBQ0 182 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 CLDN16Q9Y5I7 305 aa23.06■■□□□ 1.28
SDR39U1-221ENST00000556707 SERTM1A2A2V5 107 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 CTNSO60931 367 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 CRCPO75575 148 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 PDGFAP04085 211 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 SERPINA7P05543 415 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 FAM58BPP0C7Q3 252 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 PRR35P0CG20 571 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 H2AFXP16104 143 aaPredicted RBP23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 SERPINB4P48594 390 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 PAPD4Q6PIY7 484 aaKnown RBP23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 ASB18Q6ZVZ8 466 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 ZNF552Q9H707 407 aaPredicted RBP23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 KCNK9Q9NPC2 374 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 ZNF451Q9Y4E5 1061 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 ATG4BQ9Y4P1 393 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 ASB4Q9Y574 426 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 CPAMD8Q8IZJ3 1885 aa23.05■■□□□ 1.28
SDR39U1-221ENST00000556707 TGFBR3LH3BV60 316 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 C1QL1O75973 258 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 ZWINTO95229 277 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 GBAP04062 536 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 CHN1P15882 459 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 AP2B1P63010 937 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 TNFRSF17Q02223 184 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 GALNT1Q10472 559 aaPredicted RBP23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 TBL3Q12788 808 aaKnown RBP23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 NFATC3Q12968 1075 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 MPP2Q14168 576 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 PLAG1Q6DJT9 500 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 COMMD6Q7Z4G1 85 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 ACPTQ9BZG2 426 aa23.04■■□□□ 1.28
SDR39U1-221ENST00000556707 SYNDIG1LA6NDD5 238 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 PROM1O43490 865 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 ALPPP05187 535 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 KLK1P06870 262 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 CELA2AP08217 269 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 DHRS4L1P0CG22 281 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 UROSP10746 265 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 TPP2P29144 1249 aaPredicted RBP23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 TLX1P31314 330 aaPredicted RBP23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 BUD31P41223 144 aaPredicted RBP23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 EXT1Q16394 746 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 SCIMPQ6UWF3 145 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 ZCCHC23Q6ZST2 131 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 CLNKQ7Z7G1 428 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 CUZD1Q86UP6 607 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 NUDCD3Q8IVD9 361 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 ZNF843Q8N446 348 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 OR6Y1Q8NGX8 325 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 CHTF18Q8WVB6 975 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 TLCD1Q96CP7 247 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 RPF2Q9H7B2 306 aaKnown RBP23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 C5AR2Q9P296 337 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 BSNQ9UPA5 3926 aa23.03■■□□□ 1.28
SDR39U1-221ENST00000556707 BIRC5O15392 142 aa23.02■■□□□ 1.28
SDR39U1-221ENST00000556707 CHRNGP07510 517 aa23.02■■□□□ 1.28
SDR39U1-221ENST00000556707 SERPINB3P29508 390 aa23.02■■□□□ 1.28
SDR39U1-221ENST00000556707 SERPINB5P36952 375 aa23.02■■□□□ 1.28
SDR39U1-221ENST00000556707 BTBD16Q32M84 506 aa23.02■■□□□ 1.28
SDR39U1-221ENST00000556707 ARL13AQ5H913 290 aaPredicted RBP23.02■■□□□ 1.28
SDR39U1-221ENST00000556707 CCNYL2Q5T2Q4 361 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms