RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 KCMF1Q9P0J7 381 aa18.34■□□□□ 0.53
PRKCH-219ENST00000555906 MYOTQ9UBF9 498 aa18.34■□□□□ 0.53
PRKCH-219ENST00000555906 RNF112Q9ULX5 631 aa18.34■□□□□ 0.53
PRKCH-219ENST00000555906 ERVK-11Q9UQG0 969 aa18.34■□□□□ 0.53
PRKCH-219ENST00000555906 CLCA3PQ9Y6N3 262 aa18.34■□□□□ 0.53
PRKCH-219ENST00000555906 CDC40O60508 579 aaKnown RBP eCLIP18.33■□□□□ 0.52
PRKCH-219ENST00000555906 OR2J2O76002 312 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 SCELO95171 688 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 IFNA16P05015 189 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 TPOP07202 933 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 SSTR2P30874 369 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 IRF8Q02556 426 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 BMPR2Q13873 1038 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 SERTAD2Q14140 314 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 HIST2H2ACQ16777 129 aaPredicted RBP18.33■□□□□ 0.52
PRKCH-219ENST00000555906 HIST2H2AA3Q6FI13 130 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 ARHGAP11AQ6P4F7 1023 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 HSDL2Q6YN16 418 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 ZNF295-AS1Q8N0V1 137 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 ACBD4Q8NC06 268 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 EXT2Q93063 718 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 F2RL3Q96RI0 385 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 MS4A8Q9BY19 250 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 GRHL1Q9NZI5 618 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 COQ3Q9NZJ6 369 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 NUDT4Q9NZJ9 180 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 VTI1BQ9UEU0 232 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 F8P00451 2351 aa18.33■□□□□ 0.52
PRKCH-219ENST00000555906 HCFC1P51610 2035 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 ACOT7O00154 380 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 CCNT2O60583 730 aaKnown RBP18.32■□□□□ 0.52
PRKCH-219ENST00000555906 OR6B1O95007 311 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 SERPINB1P30740 379 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 CASP2P42575 452 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 MSH2P43246 934 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 KIR3DL1P43629 444 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 MRPS25P82663 173 aaKnown RBP18.32■□□□□ 0.52
PRKCH-219ENST00000555906 STX4Q12846 297 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 CHIT1Q13231 466 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 TMEM35AQ53FP2 167 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 ZNF793Q6ZN11 406 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 C16orf47Q6ZP98 133 aaPredicted RBP18.32■□□□□ 0.52
PRKCH-219ENST00000555906 MAATS1Q7Z4T9 603 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 OR8K3Q8NH51 312 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 ZNF473Q8WTR7 871 aaKnown RBP18.32■□□□□ 0.52
PRKCH-219ENST00000555906 CA5BP1Q8WTZ4 195 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 PTPMT1Q8WUK0 201 aaPredicted RBP18.32■□□□□ 0.52
PRKCH-219ENST00000555906 UBTD2Q8WUN7 234 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 UBE2E3Q969T4 207 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 SDCCAG3Q96C92 435 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 C14orf79Q96F83 325 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 RASL10BQ96S79 203 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 SPOCK3Q9BQ16 436 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 TBCDQ9BTW9 1192 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 ALOXE3Q9BYJ1 711 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 CD244Q9BZW8 370 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 TP63Q9H3D4 680 aaPredicted RBP18.32■□□□□ 0.52
PRKCH-219ENST00000555906 DEPPQ9NTK1 212 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 SPACA6W5XKT8 324 aa18.32■□□□□ 0.52
PRKCH-219ENST00000555906 RAD51CO43502 376 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 SLC35E2BP0CK96 405 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 SPRP35270 261 aaPredicted RBP18.31■□□□□ 0.52
PRKCH-219ENST00000555906 SOX3P41225 446 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 HK2P52789 917 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 GPX6P59796 221 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 SLMAPQ14BN4 828 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 GRTP1Q5TC63 336 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 C3orf62Q6ZUJ4 267 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 UBE3DQ7Z6J8 389 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 CTAGE3PQ8IX95 158 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 LAS2Q8IYD9 372 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 C7orf57Q8NEG2 295 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 SPATA4Q8NEY3 305 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 OR2M7Q8NG81 312 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 STAG3L4Q8TBR4 150 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 ALG9Q9H6U8 611 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 ZDHHC11Q9H8X9 412 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 PYCARDQ9ULZ3 195 aa18.31■□□□□ 0.52
PRKCH-219ENST00000555906 C17orf105B2RV13 164 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 WWP2O00308 870 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 KERAO60938 352 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 HIST1H1TP22492 207 aaPredicted RBP18.3■□□□□ 0.52
PRKCH-219ENST00000555906 ATP5A1P25705 553 aaKnown RBP18.3■□□□□ 0.52
PRKCH-219ENST00000555906 PCDH1Q08174 1060 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 NAB1Q13506 487 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 TMEM211Q6ICI0 200 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 MED27Q6P2C8 311 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 IL20RBQ6UXL0 311 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 RTL4Q6ZR62 310 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 RGS9BPQ6ZS82 235 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 MARVELD2Q8N4S9 558 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 ACOT4Q8N9L9 421 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 GOLM1Q8NBJ4 401 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 OR52N2Q8NGI0 321 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 SLC2A12Q8TD20 617 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 ATOH8Q96SQ7 321 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 MAPKAP1Q9BPZ7 522 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 TREX2Q9BQ50 279 aaPredicted RBP18.3■□□□□ 0.52
PRKCH-219ENST00000555906 OR8D2Q9GZM6 311 aa18.3■□□□□ 0.52
PRKCH-219ENST00000555906 ENKD1Q9H0I2 346 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms