RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ERLIN1O75477 346 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 SEMA3DO95025 777 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 SCELO95171 688 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 PROCP04070 461 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 IFNA16P05015 189 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 CELA2AP08217 269 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 CPA3P15088 417 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 PPP2R1BP30154 601 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 DEKP35659 375 aaKnown RBP11.35□□□□□ -0.59
SRP54-206ENST00000555317 PKNOX1P55347 436 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 ZNF33BQ06732 778 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 ASPHQ12797 758 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 UNC50Q53HI1 259 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 SLC6A19Q695T7 634 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 LETMD1Q6P1Q0 360 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 GPR180Q86V85 440 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 IQCKQ8N0W5 287 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 SLC5A8Q8N695 610 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 RBMXL3Q8N7X1 1067 aaKnown RBP11.35□□□□□ -0.59
SRP54-206ENST00000555317 CDYL2Q8N8U2 506 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 C7orf57Q8NEG2 295 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 MYRIPQ8NFW9 859 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 DNAJB14Q8TBM8 379 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 L3HYPDHQ96EM0 354 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 LMF1Q96S06 567 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 CSF3RQ99062 836 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 MAPKAP1Q9BPZ7 522 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 SORBS1Q9BX66 1292 aaKnown RBP11.35□□□□□ -0.59
SRP54-206ENST00000555317 WDR41Q9HAD4 459 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 MMP25Q9NPA2 562 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 NECTIN3Q9NQS3 549 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 LUZP4Q9P127 313 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 LGALS13Q9UHV8 139 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 RAB21Q9UL25 225 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 EMCNQ9ULC0 261 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 PPT2Q9UMR5 302 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 SLC12A4Q9UP95 1085 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 TENM4Q6N022 2769 aa11.35□□□□□ -0.59
SRP54-206ENST00000555317 FLNCQ14315 2725 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 IGKV3D-11A0A0A0MRZ8 115 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 CYR61O00622 381 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 RGS16O15492 202 aaPredicted RBP11.34□□□□□ -0.59
SRP54-206ENST00000555317 DYRK3O43781 588 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 CTNSO60931 367 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 ULK1O75385 1050 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 MYO1DO94832 1006 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 OR4F21O95013 312 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 ENO1P06733 434 aaKnown RBP11.34□□□□□ -0.59
SRP54-206ENST00000555317 COX7A2P14406 83 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 SOX11P35716 441 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 SLC26A5P58743 744 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 SLC18A2Q05940 514 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 SERTAD2Q14140 314 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 TLR1Q15399 786 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 TERF2Q15554 542 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 TRABD2AQ86V40 505 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 SCUBE1Q8IWY4 988 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 ZCCHC7Q8N3Z6 543 aaKnown RBP11.34□□□□□ -0.59
SRP54-206ENST00000555317 SUN3Q8TAQ9 357 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 METTL6Q8TCB7 284 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 CPT1CQ8TCG5 803 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 ZNF354BQ96LW1 612 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.34□□□□□ -0.59
SRP54-206ENST00000555317 CENPHQ9H3R5 247 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 BRF2Q9HAW0 419 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 ZBTB20Q9HC78 741 aaPredicted RBP11.34□□□□□ -0.59
SRP54-206ENST00000555317 MID1IP1Q9NPA3 183 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 ADAP2Q9NPF8 381 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 MKS1Q9NXB0 559 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 SENP1Q9P0U3 644 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 CLCA3PQ9Y6N3 262 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 CPAMD8Q8IZJ3 1885 aa11.34□□□□□ -0.59
SRP54-206ENST00000555317 SVILO95425 2214 aa11.33□□□□□ -0.59
SRP54-206ENST00000555317 UBR5O95071 2799 aaPredicted RBP11.33□□□□□ -0.6
SRP54-206ENST00000555317 G3V2L1 256 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 H3BQF6 201 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 MANBAO00462 879 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 PPP6CO00743 305 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 ETHE1O95571 254 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 PDYNP01213 254 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 FAM58BPP0C7Q3 252 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 NR2F6P10588 404 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 HSD3B1P14060 373 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 TNNI3P19429 210 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 HSD3B2P26439 372 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 CD97P48960 835 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 HNRNPFP52597 415 aaKnown RBP11.33□□□□□ -0.6
SRP54-206ENST00000555317 NAGLUP54802 743 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 MLLT10P55197 1068 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 DNAJB13P59910 316 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 TNFRSF17Q02223 184 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 CSTF3Q12996 717 aaKnown RBP11.33□□□□□ -0.6
SRP54-206ENST00000555317 ZNF169Q14929 603 aaPredicted RBP11.33□□□□□ -0.6
SRP54-206ENST00000555317 ELAVL1Q15717 326 aaKnown RBP11.33□□□□□ -0.6
SRP54-206ENST00000555317 MEP1AQ16819 746 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 CCNYL2Q5T2Q4 361 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 LIPMQ5VYY2 423 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 IGFL2Q6UWQ7 119 aa11.33□□□□□ -0.6
SRP54-206ENST00000555317 SH2D5Q6ZV89 423 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms