RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 TMEM71Q6P5X7 295 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 ZNF574Q6ZN55 896 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-212ENST00000555254 DHDDSQ86SQ9 333 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 KCT2Q8NC54 265 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 OR8J2Q8NGG1 315 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 OR8K5Q8NH50 307 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 ZCCHC10Q8TBK6 192 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 UTP15Q8TED0 518 aaKnown RBP16.71■□□□□ 0.27
PSEN1-212ENST00000555254 ZCCHC14Q8WYQ9 949 aaKnown RBP16.71■□□□□ 0.27
PSEN1-212ENST00000555254 TM4SF18Q96CE8 201 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 COQ8BQ96D53 544 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 TEFMQ96QE5 360 aaKnown RBP16.71■□□□□ 0.27
PSEN1-212ENST00000555254 SERINC2Q96SA4 455 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 ZNF717Q9BY31 904 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-212ENST00000555254 BHLHE41Q9C0J9 482 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-212ENST00000555254 NRSN2Q9GZP1 204 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 FAM60AQ9NP50 221 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 TMEM9Q9P0T7 183 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 PCDHGB4Q9UN71 923 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 L3MBTL1Q9Y468 752 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.71■□□□□ 0.27
PSEN1-212ENST00000555254 SPACA6W5XKT8 324 aa16.71■□□□□ 0.27
PSEN1-212ENST00000555254 A0A0A6YYD5 115 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 IGHV5-51A0A0C4DH38 117 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 PRSS51A0A1B0GVH4 220 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 PMS2P1A4D2B8 440 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 ERN1O75460 977 aaKnown RBP16.7■□□□□ 0.26
PSEN1-212ENST00000555254 ANP32DO95626 131 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 ALOX12P18054 663 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 CSF2RBP32927 897 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 ALDH9A1P49189 494 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 ZFP36L1Q07352 338 aaKnown RBP16.7■□□□□ 0.26
PSEN1-212ENST00000555254 PAGE3Q5JUK9 113 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 SAMD4BQ5PRF9 694 aaKnown RBP16.7■□□□□ 0.26
PSEN1-212ENST00000555254 OR4F3Q6IEY1 312 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 NIPAL1Q6NVV3 410 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 RIPOR1Q6ZS17 1223 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 PRSS42Q7Z5A4 293 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 CAMKMTQ7Z624 323 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 ULK2Q8IYT8 1036 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 RCBTB1Q8NDN9 531 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.7■□□□□ 0.26
PSEN1-212ENST00000555254 CCDC74BQ96LY2 380 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 SH3GL1Q99961 368 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 POLR1BQ9H9Y6 1135 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 SPAG4Q9NPE6 437 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 LHX9Q9NQ69 397 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.7■□□□□ 0.26
PSEN1-212ENST00000555254 PHF11Q9UIL8 331 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 AP3M1Q9Y2T2 418 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 SLC22A7Q9Y694 548 aa16.7■□□□□ 0.26
PSEN1-212ENST00000555254 MN1Q10571 1320 aaPredicted RBP16.7■□□□□ 0.26
PSEN1-212ENST00000555254 CCDC187A0A096LP49 1063 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 A0A096LPI6 279 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 IGHV5-10-1A0A0J9YXX1 117 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 ASPDHA6ND91 283 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 RFXANKO14593 260 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 NVLO15381 856 aaKnown RBP16.69■□□□□ 0.26
PSEN1-212ENST00000555254 TOX3O15405 576 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-212ENST00000555254 P2RX6O15547 441 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 TMPRSS11DO60235 418 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 BRINP1O60477 761 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 TBX19O60806 448 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 STAMBPO95630 424 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 FURINP09958 794 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 LAMP1P11279 417 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 DDCP20711 480 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 TLX1P31314 330 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-212ENST00000555254 CCKBRP32239 447 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 SEPHS1P49903 392 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 PLIN5Q00G26 463 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 RTP5Q14D33 572 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 RAB11FIP2Q7L804 512 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 SLITRK4Q8IW52 837 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 FBXW8Q8N3Y1 598 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 TTC29Q8NA56 475 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-212ENST00000555254 KDF1Q8NAX2 398 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-212ENST00000555254 OR4D9Q8NGE8 314 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 WDR36Q8NI36 951 aaKnown RBP16.69■□□□□ 0.26
PSEN1-212ENST00000555254 NUDT8Q8WV74 236 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 GTF2H4Q92759 462 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 GBP5Q96PP8 586 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 AICDAQ9GZX7 198 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 FANCEQ9HB96 536 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 ANKHQ9HCJ1 492 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 BCAP29Q9UHQ4 241 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 FBXW2Q9UKT8 454 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 PSME2Q9UL46 239 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 PCDHGA7Q9Y5G6 932 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 ASXL3Q9C0F0 2248 aa16.69■□□□□ 0.26
PSEN1-212ENST00000555254 IGSF10Q6WRI0 2623 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 PTPRBP23467 1997 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 A0A1W2PNU3 283 aaPredicted RBP16.68■□□□□ 0.26
PSEN1-212ENST00000555254 CYSRT1A8MQ03 144 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 KLHL18O94889 574 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 TNFSF15O95150 251 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 SCELO95171 688 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 CPSF4O95639 269 aaKnown RBP16.68■□□□□ 0.26
PSEN1-212ENST00000555254 SMIM10L1P0DMW3 83 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 PIM1P11309 404 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms