RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 MTCH1Q9NZJ7 389 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 PTPRTO14522 1441 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 KIAA1217Q5T5P2 1943 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 IGKV3D-15A0A087WSY6 115 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 K7ERQ8 282 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 IGKV3-15P01624 115 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 ICAM1P05362 532 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 FBLP22087 321 aaKnown RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 TROAPQ12815 778 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 AIMP2Q13155 320 aaKnown RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 FLYWCH1Q4VC44 716 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 HEPHL1Q6MZM0 1159 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 CAPN13Q6MZZ7 669 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 LPCAT3Q6P1A2 487 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 RDH10Q8IZV5 341 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM151AQ8N4L1 468 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 STK35Q8TDR2 534 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 NXNL1Q96CM4 212 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 HAVCR1Q96D42 359 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 PEX11GQ96HA9 241 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 CWH43Q9H720 699 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM248Q9NWD8 314 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 LMO7Q8WWI1 1683 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF850A8MQ14 1090 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 CCNKO75909 580 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 CST1P01037 141 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 SRPRAP08240 638 aaKnown RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 ANXA4P09525 319 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 IRF9Q00978 393 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 GBE1Q04446 702 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 DHCR24Q15392 516 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 STOML3Q8TAV4 291 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 RSPRY1Q96DX4 576 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 QRFPRQ96P65 431 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 XYLT2Q9H1B5 865 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 SP140LQ9H930 580 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 TBC1D13Q9NVG8 400 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 DLGAP4Q9Y2H0 992 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 GLYATL1P3A0A0U1RQE8 302 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 A0A1B0GVI7 797 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 APLP1P51693 650 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CDKN3Q16667 212 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 NKAIN2Q5VXU1 208 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RANBP3LQ86VV4 465 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RAB43Q86YS6 212 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ERI1Q8IV48 349 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TUSC5Q8IXB3 177 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 BRI3BPQ8WY22 251 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC39A8Q9C0K1 460 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 DNTTIP1Q9H147 329 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 COL20A1Q9P218 1284 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 EFCAB9A8MZ26 197 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TM9SF1O15321 606 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 BMP10O95393 424 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 DCST2Q5T1A1 773 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PDSS1Q5T2R2 415 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 GPRIN3Q6ZVF9 776 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TMPRSS6Q8IU80 811 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 KBTBD8Q8NFY9 601 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OR13C4Q8NGS5 318 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SCAMP4Q969E2 229 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RANBP3Q9H6Z4 567 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 IL17RBQ9NRM6 502 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SPATA31A6Q5VVP1 1343 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 A6NHS1 94 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 EIF3DO15371 548 aaKnown RBP eCLIP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC25A27O95847 323 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 STOMP27105 288 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PIGAP37287 484 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RENBPP51606 427 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 KLHDC7AQ5VTJ3 777 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CLEC17AQ6ZS10 378 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SSX7Q7RTT5 188 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RBM15BQ8NDT2 890 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLAMF9Q96A28 289 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 NUS1Q96E22 293 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC2A6Q9UGQ3 507 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TNS2Q63HR2 1409 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 BORCS7-ASMTA0A0B4J1R7 106 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC9A3R1O14745 358 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RBP1P09455 135 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 IL4RP24394 825 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PHC1P78364 1004 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ROR2Q01974 943 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 GPR153Q6NV75 609 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 C14orf80Q86SX3 495 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OR5M8Q8NGP6 311 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 BORCS7Q96B45 105 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PARP12Q9H0J9 701 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 B3GAT2Q9NPZ5 323 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TAC3Q9UHF0 121 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 LEF1Q9UJU2 399 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 MATN3O15232 486 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 P04436 131 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SPATA31C1P0DKV0 1188 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TOB1P50616 345 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SEC61A1P61619 476 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF33BQ06732 778 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FAM214AQ32MH5 1076 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PIWIL4Q7Z3Z4 852 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms