RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ZCCHC7Q8N3Z6 543 aaKnown RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 ACOT4Q8N9L9 421 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 FAM47BQ8NA70 645 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 APCDD1LQ8NCL9 501 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 LRRN4CLQ8ND94 238 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 ST6GALNAC3Q8NDV1 305 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 MDS2Q8NDY4 140 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 TMEM52Q8NDY8 209 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 C7orf57Q8NEG2 295 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 HUS1BQ8NHY5 278 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 SUN3Q8TAQ9 357 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 WDR20Q8TBZ3 569 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 ACMSDQ8TDX5 336 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 GRHL3Q8TE85 626 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 MZB1Q8WU39 189 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 FAR1Q8WVX9 515 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 PHF21BQ96EK2 531 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 SCYL1Q96KG9 808 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 MAGEB10Q96LZ2 347 aaPredicted RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 CSF3RQ99062 836 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 SLX1AQ9BQ83 275 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 CENPKQ9BS16 269 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 TRIM45Q9H8W5 580 aaPredicted RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 ADAP2Q9NPF8 381 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 PLA2G3Q9NZ20 509 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 PSMC3IPQ9P2W1 217 aaPredicted RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 ANKUB1A6NFN9 424 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 A8MT66 165 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 A8MUI8 341 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 RTCAO00442 366 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 PLPP1O14494 284 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 MAN1A2O60476 641 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 SEMA3DO95025 777 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 GSTA1P08263 222 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 EDN3P14138 238 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 PTX3P26022 381 aaPredicted RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 SSR2P43308 183 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 CLCN2P51788 898 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 GPR143P51810 404 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 CCNG1P51959 295 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 RAP1GDS1P52306 607 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 WDR4P57081 412 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 IGLV3-21P80748 117 aaPredicted RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 TRAF3Q13114 568 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 SLC13A2Q13183 592 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 MRPL49Q13405 166 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 CUL3Q13618 768 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 TUBA3CQ13748 450 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 DDX39BQ13838 428 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 SERTAD2Q14140 314 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 RASA2Q15283 850 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 ZRSR2Q15696 482 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 ELAVL1Q15717 326 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 CPSF6Q16630 551 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 TEX35Q5T0J7 233 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 FHL5Q5TD97 284 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 ZNF324BQ6AW86 544 aaPredicted RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 FCRLBQ6BAA4 426 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 TUBA3EQ6PEY2 450 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 FAM180AQ6UWF9 173 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 RPS19BP1Q86WX3 136 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 MYLK4Q86YV6 388 aaPredicted RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 GSPT2Q8IYD1 628 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 BCORP1Q8N888 145 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 B3GNT7Q8NFL0 401 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 MYRIPQ8NFW9 859 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 OR52B6Q8NGF0 335 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 ZNF483Q8TF39 744 aaPredicted RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 RGMAQ96B86 450 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 VMP1Q96GC9 406 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 SCMH1Q96GD3 660 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 NSUN5Q96P11 429 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 MTERF1Q99551 399 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 MAPKAP1Q9BPZ7 522 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 CCDC77Q9BR77 488 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 UTP23Q9BRU9 249 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 ZNF717Q9BY31 904 aaPredicted RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 OR51B5Q9H339 312 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 NOL11Q9H8H0 719 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 DDX31Q9H8H2 851 aaKnown RBP7.03□□□□□ -1.28
LINC00640-201ENST00000554409 PPCSQ9HAB8 311 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 ZBTB26Q9HCK0 441 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 MS4A12Q9NXJ0 267 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 VTI1BQ9UEU0 232 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 PHF11Q9UIL8 331 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 RNF11Q9Y3C5 154 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 SPACA6W5XKT8 324 aa7.03□□□□□ -1.28
LINC00640-201ENST00000554409 A0A0A6YYD5 115 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 GABRR3A8MPY1 467 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 A8MUA0 341 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 FCHO1O14526 889 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 MYO1DO94832 1006 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 RASAL1O95294 804 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 ETHE1O95571 254 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 OTCP00480 354 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 F10P00742 488 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 CRYABP02511 175 aaKnown RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 TAC1P20366 129 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 CPN2P22792 545 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms