RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CENPKQ9BS16 269 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 TRIM45Q9H8W5 580 aaPredicted RBP9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 ADAP2Q9NPF8 381 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 ERRFI1Q9UJM3 462 aaPredicted RBP9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 ANGPTL3Q9Y5C1 460 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 PCDHGA11Q9Y5H2 935 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 CLDN16Q9Y5I7 305 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 SPACA6W5XKT8 324 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 ASPDHA6ND91 283 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 H0YIV9 168 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 NEURL1O76050 574 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 MYO1DO94832 1006 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 STSP08842 583 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 PCNAP12004 261 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 HIST1H1TP22492 207 aaPredicted RBP9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 ATP5A1P25705 553 aaKnown RBP9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 TRHRP34981 398 aaPredicted RBP9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 CD96P40200 585 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 CLCN2P51788 898 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 HNRNPFP52597 415 aaKnown RBP9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 PER3P56645 1201 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 MLF1P58340 268 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 PHEXP78562 749 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 GTF2H2Q13888 395 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 OR1C1Q15619 314 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 ELAVL1Q15717 326 aaKnown RBP9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 AP5B1Q2VPB7 878 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 C10orf62Q5T681 223 aaPredicted RBP9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 DEPDC1Q5TB30 811 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 GTF2H2CQ6P1K8 395 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 TRMT10CQ7L0Y3 403 aaKnown RBP9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 UBE3DQ7Z6J8 389 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 IFT20Q8IY31 132 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 TMEM132CQ8N3T6 1108 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 KIF2BQ8N4N8 673 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 L3MBTL4Q8NA19 623 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 FAM47BQ8NA70 645 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 TMEM52Q8NDY8 209 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 DCAKDQ8WVC6 231 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 VMP1Q96GC9 406 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 SIGLEC12Q96PQ1 595 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 DEFB126Q9BYW3 111 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 VPS11Q9H270 941 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 CDCP1Q9H5V8 836 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 ACTR8Q9H981 624 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 MS4A12Q9NXJ0 267 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 PSD3Q9NYI0 1048 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 KCMF1Q9P0J7 381 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 PPT2Q9UMR5 302 aa9.72□□□□□ -0.85
PTCD2P1-201ENST00000554393 ITPR2Q14571 2701 aa9.71□□□□□ -0.85
PTCD2P1-201ENST00000554393 A0A1B0GUH1 482 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 STX16-NPEPL1H3BU86 382 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 TGFBR3LH3BV60 316 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 FCHO1O14526 889 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 STX16O14662 325 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 MAN1A2O60476 641 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 MLYCDO95822 493 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 TGFB1P01137 390 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 SNRPAP09012 282 aaKnown RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 RNF224P0DH78 156 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 POU3F2P20265 443 aaPredicted RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 PTX3P26022 381 aaPredicted RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 TPP2P29144 1249 aaPredicted RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 EEF1DP29692 281 aaKnown RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 SSR2P43308 183 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 CYB561P49447 251 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 HLCSP50747 726 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 GPR143P51810 404 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 OC90Q02509 493 aaPredicted RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 BIKQ13323 160 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 CUL3Q13618 768 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 SERTAD2Q14140 314 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 LGSNQ5TDP6 509 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF793Q6ZN11 406 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 GOLGA7Q7Z5G4 137 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 LCA5Q86VQ0 697 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 PLD6Q8N2A8 252 aaKnown RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZCCHC7Q8N3Z6 543 aaKnown RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 FAM98AQ8NCA5 519 aaKnown RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 HUS1BQ8NHY5 278 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 DAZLQ92904 295 aaKnown RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 RGMAQ96B86 450 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 TRIM44Q96DX7 344 aaPredicted RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 MTBPQ96DY7 904 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 CSF3RQ99062 836 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 CCDC77Q9BR77 488 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 IPPKQ9H8X2 491 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 DMRT3Q9NQL9 472 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 LRFN1Q9P244 771 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 CPSF2Q9P2I0 782 aaKnown RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 VTI1BQ9UEU0 232 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 PLEKHB1Q9UF11 243 aaPredicted RBP9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 FETUBQ9UGM5 382 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 NF1P21359 2839 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 GTF3C1Q12789 2109 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 DNHD1Q96M86 4753 aa9.71□□□□□ -0.86
PTCD2P1-201ENST00000554393 CENPEQ02224 2701 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 MYO7BQ6PIF6 2116 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 TRBV11-1A0A0K0K1C0 115 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms