RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 POLR2EP19388 210 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 MATN1P21941 496 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 HRH2P25021 359 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 HOXD12P35452 270 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 CD86P42081 329 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 PTGER3P43115 390 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 MAGEA11P43364 429 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 RGS4P49798 205 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 PLK1P53350 603 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ISL1P61371 349 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SIM1P81133 766 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ECT2LQ008S8 904 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ABHD18Q0P651 414 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ATP1A4Q13733 1029 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 CAPRIN1Q14444 709 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 GRB7Q14451 532 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF235Q14590 738 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 OR4D1Q15615 310 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 RBBP7Q16576 425 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 HIST2H2ACQ16777 129 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TTLL9Q3SXZ7 439 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TIMM50Q3ZCQ8 353 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TIGD2Q4W5G0 525 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SLC39A12Q504Y0 691 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SOWAHCQ53LP3 525 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ZMAT1Q5H9K5 638 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SIRPB2Q5JXA9 342 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 MLIPQ5VWP3 458 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 LYPLAL1Q5VWZ2 237 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 CAPN13Q6MZZ7 669 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SHQ1Q6PI26 577 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 DLEU7Q6UYE1 221 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ESPNLQ6ZVH7 1005 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 RABEPKQ7Z6M1 372 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 GPSM1Q86YR5 675 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 MICU2Q8IYU8 434 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 OFCC1Q8IZS5 231 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TMEM132CQ8N3T6 1108 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 HDDC3Q8N4P3 179 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 PAF1Q8N7H5 531 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 AMER2Q8N7J2 671 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ARL10Q8N8L6 244 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 FNDC5Q8NAU1 212 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 KBTBD8Q8NFY9 601 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 OR52K2Q8NGK3 314 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 OR6Q1Q8NGQ2 317 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 OR14K1Q8NGZ2 314 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 DNAJB14Q8TBM8 379 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 PROKR1Q8TCW9 393 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 UBTD2Q8WUN7 234 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SLC13A3Q8WWT9 602 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SLC35B4Q969S0 331 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 FUBP1Q96AE4 644 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 FKBP10Q96AY3 582 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 CHFRQ96EP1 664 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SLC47A1Q96FL8 570 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 METTL2AQ96IZ6 378 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 C8orf48Q96LL4 319 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 NSMCE3Q96MG7 304 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 DPYSL5Q9BPU6 564 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SLC39A3Q9BRY0 314 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ADGRE3Q9BY15 652 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TPSD1Q9BZJ3 242 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SIK2Q9H0K1 926 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 OR10A2Q9H208 303 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 MAGEH1Q9H213 219 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TOR3AQ9H497 397 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TUBB1Q9H4B7 451 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 DUSP21Q9H596 190 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 KAT8Q9H7Z6 458 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 ACTR8Q9H981 624 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SEC61A2Q9H9S3 476 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SIAEQ9HAT2 523 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 IL1RL2Q9HB29 575 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 NTN4Q9HB63 628 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 FBRSL1Q9HCM7 1045 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TM9SF3Q9HD45 589 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 NT5MQ9NPB1 228 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TRNAU1APQ9NX07 287 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 CCDC59Q9P031 241 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 USP36Q9P275 1121 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 KLHL42Q9P2K6 505 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 UXTQ9UBK9 157 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 KLK13Q9UKR3 277 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 MKLN1Q9UL63 735 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 CORO2BQ9UQ03 480 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SCML2Q9UQR0 700 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 MAN2B2Q9Y2E5 1009 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TDRKHQ9Y2W6 561 aaKnown RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 IFT52Q9Y366 437 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 TSC22D4Q9Y3Q8 395 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 SDK1Q7Z5N4 2213 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 NUP210Q8TEM1 1887 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-203ENST00000554264 FRYQ5TBA9 3013 aa5.68□□□□□ -1.5
VPS33B-203ENST00000554264 CHD5Q8TDI0 1954 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF106Q9H2Y7 1883 aaKnown RBP5.67□□□□□ -1.5
VPS33B-203ENST00000554264 ZFYVE26Q68DK2 2539 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 A0A096LPI6 279 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 SPAARA0A1B0GVQ0 90 aa5.67□□□□□ -1.5
VPS33B-203ENST00000554264 ASPDHA6ND91 283 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms