RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 MCUR1Q96AQ8 359 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 LRRC58Q96CX6 371 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 ZBED6CLQ96FA7 236 aaPredicted RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 SLC45A3Q96JT2 553 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 RAB3IPQ96QF0 476 aaPredicted RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 NPAS2Q99743 824 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 MAPKAP1Q9BPZ7 522 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 GPATCH1Q9BRR8 931 aaKnown RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 NDC1Q9BTX1 674 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 CADM1Q9BY67 442 aaKnown RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 NEUROD4Q9HD90 331 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 SERHLQ9NQF3 203 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 STARD5Q9NSY2 213 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 CUTCQ9NTM9 273 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 ACSS1Q9NUB1 689 aaPredicted RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 GIMAP4Q9NUV9 329 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 KCMF1Q9P0J7 381 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 AKAP7Q9P0M2 348 aaPredicted RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 MAP10Q9P2G4 905 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 CROTQ9UKG9 612 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 RARRES3Q9UL19 164 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 PSME2Q9UL46 239 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 CDC14AQ9UNH5 594 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 MRPS2Q9Y399 296 aaKnown RBP7.24□□□□□ -1.25
TDP1-209ENST00000554180 NAALAD2Q9Y3Q0 740 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 ATG4BQ9Y4P1 393 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 GMEB1Q9Y692 573 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 FAM186AA6NE01 2351 aa7.24□□□□□ -1.25
TDP1-209ENST00000554180 A0A096LPI6 279 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 TRBV5-3A0A0A0MS03 114 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 A0A1B0GX78 115 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 A0A1W2PR48 441 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 SYNDIG1LA6NDD5 238 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 RFXANKO14593 260 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 DSCR3O14972 297 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 CASC3O15234 703 aaKnown RBP7.23□□□□□ -1.25
TDP1-209ENST00000554180 GSC2O15499 205 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 FOXS1O43638 330 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 DNAJA2O60884 412 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 CTSBP07858 339 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 HBQ1P09105 142 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 ZCCHC18P0CG32 403 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 RNH1P13489 461 aaKnown RBP7.23□□□□□ -1.25
TDP1-209ENST00000554180 HOXB9P17482 250 aaPredicted RBP7.23□□□□□ -1.25
TDP1-209ENST00000554180 IL10P22301 178 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 CPN2P22792 545 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 PTPN6P29350 595 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 PPP2R1BP30154 601 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 NTSP30990 170 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 PGM1P36871 562 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 ALDH9A1P49189 494 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 WNT3P56703 355 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 RAB38P57729 211 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 PSME3P61289 254 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 SLC25A3Q00325 362 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 MC1RQ01726 317 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 RUNX2Q13950 521 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 DSG2Q14126 1118 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 MLC1Q15049 377 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.23□□□□□ -1.25
TDP1-209ENST00000554180 ZNF385BQ569K4 471 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 C6orf10Q5SRN2 563 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 PHF19Q5T6S3 580 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 RHBDD2Q6NTF9 364 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 SLC2A7Q6PXP3 512 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 DLEU7Q6UYE1 221 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 BNC2Q6ZN30 1099 aaPredicted RBP7.23□□□□□ -1.25
TDP1-209ENST00000554180 MED25Q71SY5 747 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 DGLUCYQ7Z3D6 616 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 DEFB107AQ8IZN7 70 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 CA13Q8N1Q1 262 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 KIF2BQ8N4N8 673 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 TRIML2Q8N7C3 387 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 AMER3Q8N944 861 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 RCBTB1Q8NDN9 531 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 C7orf57Q8NEG2 295 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 OR9A4Q8NGU2 314 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 GOT1L1Q8NHS2 421 aaPredicted RBP7.23□□□□□ -1.25
TDP1-209ENST00000554180 ZFP28Q8NHY6 868 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 PHF12Q96QT6 1004 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 CGREF1Q99674 301 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 SH3GL1Q99961 368 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 STRADBQ9C0K7 418 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 SPRTNQ9H040 489 aaPredicted RBP7.23□□□□□ -1.25
TDP1-209ENST00000554180 SLC35C2Q9NQQ7 365 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 SH3BP4Q9P0V3 963 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 ABCD2Q9UBJ2 740 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 UTS2RQ9UKP6 389 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 FBXW2Q9UKT8 454 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 CES1P1Q9UKY3 287 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 MRPS33Q9Y291 106 aaKnown RBP7.23□□□□□ -1.25
TDP1-209ENST00000554180 AP3M1Q9Y2T2 418 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 PCDHB3Q9Y5E6 796 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 PCDHGA7Q9Y5G6 932 aa7.23□□□□□ -1.25
TDP1-209ENST00000554180 A0A0A6YYC8 382 aaPredicted RBP7.22□□□□□ -1.25
TDP1-209ENST00000554180 A0A1W2PRB8 838 aa7.22□□□□□ -1.25
TDP1-209ENST00000554180 ZNF860A6NHJ4 632 aa7.22□□□□□ -1.25
TDP1-209ENST00000554180 MYO1GB0I1T2 1018 aa7.22□□□□□ -1.25
TDP1-209ENST00000554180 B4E171 279 aa7.22□□□□□ -1.25
TDP1-209ENST00000554180 I3L1I5 382 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms