RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 CLDN16Q9Y5I7 305 aa13.26□□□□□ -0.29
PTCH1-226ENST00000553011 ZNF462Q96JM2 2506 aa13.26□□□□□ -0.29
PTCH1-226ENST00000553011 IGKV3D-11A0A0A0MRZ8 115 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 MYOCOSA0A1B0GUC4 107 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 GOLGA6L10A6NI86 522 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 TM9SF1O15321 606 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 NPHS1O60500 1241 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 PRKRAO75569 313 aaKnown RBP13.25□□□□□ -0.29
PTCH1-226ENST00000553011 CRCPO75575 148 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 DHRS4L1P0CG22 281 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 ARRB2P32121 409 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 OR4D2P58180 307 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 MAGOHP61326 146 aaKnown RBP13.25□□□□□ -0.29
PTCH1-226ENST00000553011 HMGCS1Q01581 520 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 GALNT1Q10472 559 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-226ENST00000553011 CSTF3Q12996 717 aaKnown RBP13.25□□□□□ -0.29
PTCH1-226ENST00000553011 RCN2Q14257 317 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 C18orf63Q68DL7 685 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 CLEC6AQ6EIG7 209 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 MRM1Q6IN84 353 aaKnown RBP13.25□□□□□ -0.29
PTCH1-226ENST00000553011 ATG14Q6ZNE5 492 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 COMMD6Q7Z4G1 85 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 CUZD1Q86UP6 607 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 NUDCD3Q8IVD9 361 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 ZNF595Q8IYB9 648 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 ANKRD42Q8N9B4 389 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 ARL8AQ96BM9 186 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 IMMP1LQ96LU5 166 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 TRMOQ9BU70 441 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 TUBB6Q9BUF5 446 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 MLXIPLQ9NP71 852 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 RIC8BQ9NVN3 520 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 AHSPQ9NZD4 102 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 FIS1Q9Y3D6 152 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 ATG4BQ9Y4P1 393 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 ASB4Q9Y574 426 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 PCDHGA9Q9Y5G4 932 aaKnown RBP13.25□□□□□ -0.29
PTCH1-226ENST00000553011 SPACA6W5XKT8 324 aa13.25□□□□□ -0.29
PTCH1-226ENST00000553011 RP1L1Q8IWN7 2480 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 TCRBV16S1A1N1A0A5B0 115 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 A8MUA0 341 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 H3BQF6 201 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 CLDN4O14493 209 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 ZWINTO95229 277 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 KLK1P06870 262 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 FAM58BPP0C7Q3 252 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 SFTPCP11686 197 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 HSD3B1P14060 373 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 HSD3B2P26439 372 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 TPP2P29144 1249 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 PPP2R1BP30154 601 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 HSD17B7P56937 341 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 SOX8P57073 446 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 TNFRSF17Q02223 184 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 ID2Q02363 134 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 ACTN3Q08043 901 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 TBL3Q12788 808 aaKnown RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 SLC13A2Q13183 592 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 MYBPC3Q14896 1274 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 LACTB2Q53H82 288 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 ARL13AQ5H913 290 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 CES4AQ5XG92 561 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 TCTN3Q6NUS6 607 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 PAPD4Q6PIY7 484 aaKnown RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 CYP20A1Q6UW02 462 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 HDXQ7Z353 690 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 GPR180Q86V85 440 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 C1orf52Q8N6N3 182 aaKnown RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 OR6Y1Q8NGX8 325 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 SREK1Q8WXA9 508 aaKnown RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 THOC3Q96J01 351 aaKnown RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 SLC25A18Q9H1K4 315 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 NMRK1Q9NWW6 199 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 LYARQ9NX58 379 aaKnown RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 GPR83Q9NYM4 423 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 VPS29Q9UBQ0 182 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 PHF11Q9UIL8 331 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 ADAM29Q9UKF5 820 aa13.24□□□□□ -0.29
PTCH1-226ENST00000553011 SMG1Q96Q15 3661 aaKnown RBP13.24□□□□□ -0.29
PTCH1-226ENST00000553011 PRRC2CQ9Y520 2896 aaKnown RBP13.23□□□□□ -0.29
PTCH1-226ENST00000553011 A0A1W2PR48 441 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 TMEM120BA0PK00 339 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 WASHC1A8K0Z3 465 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 TMEM233B4DJY2 109 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 AZIN1O14977 448 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 PROM1O43490 865 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 CTNSO60931 367 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 LDB3O75112 727 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 C1QL1O75973 258 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 SERPINA7P05543 415 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 PRR35P0CG20 571 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 UROSP10746 265 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 PGDP52209 483 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 ZNF33BQ06732 778 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 CCNYL2Q5T2Q4 361 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 AGBL2Q5U5Z8 902 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 PAGE2Q7Z2X7 111 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 KBTBD2Q8IY47 623 aa13.23□□□□□ -0.29
PTCH1-226ENST00000553011 GBP7Q8N8V2 638 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-226ENST00000553011 PPP1R14CQ8TAE6 165 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms