RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 GFM1Q96RP9 751 aaKnown RBP11.82□□□□□ -0.52
HDAC7-230ENST00000552960 HTATIP2Q9BUP3 242 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 SGK2Q9HBY8 427 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 E7EQ34 232 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 GRM6O15303 877 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 LRRTM2O43300 516 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 SCO2O43819 266 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 ETHE1O95571 254 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 GASTP01350 101 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 LRG1P02750 347 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 YES1P07947 543 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 CCNYL3P0C7X3 344 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 MYL9P24844 172 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 NSG1P42857 185 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 MC1RQ01726 317 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 HNRNPA0Q13151 305 aaKnown RBP11.82□□□□□ -0.52
HDAC7-230ENST00000552960 SCARB2Q14108 478 aa11.82□□□□□ -0.52
HDAC7-230ENST00000552960 HJURPQ8NCD3 748 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-230ENST00000552960 JPH3Q8WXH2 748 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-230ENST00000552960 OR2AG2A6NM03 316 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 GCM2O75603 506 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 C6orf47O95873 294 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 RPS3P23396 243 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CHMP24386 653 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CTSOP43234 321 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CAV3P56539 151 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 GALK2Q01415 458 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 NFE2L1Q14494 772 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 PLAG1Q6DJT9 500 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 ATCAYQ86WG3 371 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CMTM8Q8IZV2 173 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CHCHD4Q8N4Q1 142 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 ING5Q8WYH8 240 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 OVCA2Q8WZ82 227 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 C11orf54Q9H0W9 315 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 TEKT2Q9UIF3 430 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 SNX7Q9UNH6 387 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 INSL6Q9Y581 213 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CLCA3PQ9Y6N3 262 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 MN1Q10571 1320 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 TRAV19A0A0A6YYK7 116 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 NPIPB15A6NHN6 443 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 SMLR1H3BR10 107 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 TPST2O60704 377 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 ALX3O95076 343 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 ITGA2P17301 1181 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 IL12RB1P42701 662 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 HBA1P69905 142 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 MTAPQ13126 283 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 SPHARQ15513 63 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 ZNF79Q15937 498 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 GPAT3Q53EU6 434 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 C9orf50Q5SZB4 431 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 TMIGD1Q6UXZ0 262 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 PRR23CQ6ZRP0 262 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 LRRC70Q7Z2Q7 622 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 UBTD2Q8WUN7 234 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CLP1Q92989 425 aaKnown RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CIDECQ96AQ7 238 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 ZSWIM3Q96MP5 696 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 OPALINQ96PE5 141 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 ARPC5LQ9BPX5 153 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 SLC35A5Q9BS91 424 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 SLC22A4Q9H015 551 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 RDH14Q9HBH5 336 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 PADI2Q9Y2J8 665 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 HCN4Q9Y3Q4 1203 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 GRIP1Q9Y3R0 1128 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CKAP5Q14008 2032 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 PRAMEF33A0A0G2JMD5 474 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 A0A1W2PQL4 384 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 PRAMEF25A6NGN4 478 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 PLD2O14939 933 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 PRAMEF10O60809 474 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 TNNI3P19429 210 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CD22P20273 847 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 CD70P32970 193 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 DDOSTP39656 456 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 STK19P49842 368 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 GPLD1P80108 840 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 DOC2AQ14183 400 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 EIF4HQ15056 248 aaKnown RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 C22orf42Q6IC83 251 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 MACC1Q6ZN28 852 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 RNF130Q86XS8 419 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 SLC7A6Q92536 515 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 OMA1Q96E52 524 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 LINC00597Q9H2U6 94 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 HHATLQ9HCP6 504 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 COMMD3Q9UBI1 195 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 SSR3Q9UNL2 185 aa11.81□□□□□ -0.52
HDAC7-230ENST00000552960 RUVBL1Q9Y265 456 aaKnown RBP11.81□□□□□ -0.52
HDAC7-230ENST00000552960 KCNE1BA0A087WTH5 132 aa11.8□□□□□ -0.52
HDAC7-230ENST00000552960 HMX3A6NHT5 357 aa11.8□□□□□ -0.52
HDAC7-230ENST00000552960 FAM25AB3EWG3 89 aa11.8□□□□□ -0.52
HDAC7-230ENST00000552960 FAM25CB3EWG5 89 aa11.8□□□□□ -0.52
HDAC7-230ENST00000552960 FAM25GB3EWG6 89 aa11.8□□□□□ -0.52
HDAC7-230ENST00000552960 SCAMP2O15127 329 aaKnown RBP11.8□□□□□ -0.52
HDAC7-230ENST00000552960 OR10H3O60404 316 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms