RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 LYARQ9NX58 379 aaKnown RBP18.19■□□□□ 0.5
DDX54-207ENST00000550016 PCDHGA9Q9Y5G4 932 aaKnown RBP18.19■□□□□ 0.5
DDX54-207ENST00000550016 IGKV3D-11A0A0A0MRZ8 115 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 WDR91A4D1P6 747 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 TMPRSS11DO60235 418 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 CTNSO60931 367 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 KLK1P06870 262 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 FAM58BPP0C7Q3 252 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 CHN1P15882 459 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 SERPINB3P29508 390 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 SLC18A1P54219 525 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 OR4D2P58180 307 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 ACTN3Q08043 901 aaPredicted RBP18.18■□□□□ 0.5
DDX54-207ENST00000550016 TBL3Q12788 808 aaKnown RBP18.18■□□□□ 0.5
DDX54-207ENST00000550016 SLC13A2Q13183 592 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 SOWAHCQ53LP3 525 aaPredicted RBP18.18■□□□□ 0.5
DDX54-207ENST00000550016 SFT2D3Q587I9 215 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 ARL13AQ5H913 290 aaPredicted RBP18.18■□□□□ 0.5
DDX54-207ENST00000550016 SCIMPQ6UWF3 145 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 COMMD6Q7Z4G1 85 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 CUZD1Q86UP6 607 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 SCUBE1Q8IWY4 988 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 HOMEZQ8IX15 550 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 PARP9Q8IXQ6 854 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 EFCAB3Q8N7B9 438 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 PPP1R14CQ8TAE6 165 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 C9orf43Q8TAL5 461 aaPredicted RBP18.18■□□□□ 0.5
DDX54-207ENST00000550016 CHTF18Q8WVB6 975 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 PKNOX2Q96KN3 472 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 IMMP1LQ96LU5 166 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 TUBB6Q9BUF5 446 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 ACPTQ9BZG2 426 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 G3BP2Q9UN86 482 aaKnown RBP18.18■□□□□ 0.5
DDX54-207ENST00000550016 ASB4Q9Y574 426 aa18.18■□□□□ 0.5
DDX54-207ENST00000550016 IGHV3-20A0A0C4DH32 117 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 TCRBV16S1A1N1A0A5B0 115 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 TMEM120BA0PK00 339 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 ARHGAP10A1A4S6 786 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 AZIN1O14977 448 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 PROM1O43490 865 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 KLHL41O60662 606 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 GBAP04062 536 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 CHRNGP07510 517 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 FGF4P08620 206 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 ICAM2P13598 275 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 TLX1P31314 330 aaPredicted RBP18.17■□□□□ 0.5
DDX54-207ENST00000550016 HNRNPH2P55795 449 aaKnown RBP18.17■□□□□ 0.5
DDX54-207ENST00000550016 Q0VFX4 171 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 MYBPC3Q14896 1274 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 CCNYL2Q5T2Q4 361 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 HHATQ5VTY9 493 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 CLEC6AQ6EIG7 209 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 KBTBD2Q8IY47 623 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 ANKRD42Q8N9B4 389 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 FDCSPQ8NFU4 85 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 ARL8AQ96BM9 186 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 GPR83Q9NYM4 423 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 ATG4BQ9Y4P1 393 aa18.17■□□□□ 0.5
DDX54-207ENST00000550016 SYNDIG1LA6NDD5 238 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 SEC24DO94855 1032 aaPredicted RBP18.16■□□□□ 0.5
DDX54-207ENST00000550016 SERPINE1P05121 402 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 ITGA3P26006 1051 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 TPP2P29144 1249 aaPredicted RBP18.16■□□□□ 0.5
DDX54-207ENST00000550016 BUD31P41223 144 aaPredicted RBP18.16■□□□□ 0.5
DDX54-207ENST00000550016 TNFRSF17Q02223 184 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 IRAK1BP1Q5VVH5 260 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 TCTN3Q6NUS6 607 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 TRIM46Q7Z4K8 759 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 C1orf52Q8N6N3 182 aaKnown RBP18.16■□□□□ 0.5
DDX54-207ENST00000550016 THOC3Q96J01 351 aaKnown RBP18.16■□□□□ 0.5
DDX54-207ENST00000550016 LPAR4Q99677 370 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 PAIP2Q9BPZ3 127 aaKnown RBP18.16■□□□□ 0.5
DDX54-207ENST00000550016 WDR77Q9BQA1 342 aaPredicted RBP18.16■□□□□ 0.5
DDX54-207ENST00000550016 LHPPQ9H008 270 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 SLC25A18Q9H1K4 315 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 RPF2Q9H7B2 306 aaKnown RBP18.16■□□□□ 0.5
DDX54-207ENST00000550016 MLXIPLQ9NP71 852 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 TRAF6Q9Y4K3 522 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 COL6A6A6NMZ7 2263 aa18.16■□□□□ 0.5
DDX54-207ENST00000550016 A0A1W2PR48 441 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 CHEK2O96017 543 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 SERPINA7P05543 415 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 NEFHP12036 1026 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 PGDP52209 483 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 MAPK12P53778 367 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 AP2B1P63010 937 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 HMGCS1Q01581 520 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 CHI3L2Q15782 390 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 IMPG1Q17R60 797 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 SPIN4Q56A73 249 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 SPDYAQ5MJ70 313 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 C18orf63Q68DL7 685 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 PAPD4Q6PIY7 484 aaKnown RBP18.15■□□□□ 0.5
DDX54-207ENST00000550016 RIPOR1Q6ZS17 1223 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 CLNKQ7Z7G1 428 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 CLYBLQ8N0X4 340 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 C7orf57Q8NEG2 295 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 TANKQ92844 425 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 NUDT9Q9BW91 350 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 SEMA4CQ9C0C4 833 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms