RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SREBF2Q12772 1141 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ILKQ13418 452 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 TCEA2Q15560 299 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 TAF12Q16514 161 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 COLEC12Q5KU26 742 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CATSPEREQ5SY80 951 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 TIGD3Q6B0B8 471 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 HIST2H2AA3Q6FI13 130 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 BRAT1Q6PJG6 821 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 METAP1DQ6UB28 335 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CCBE1Q6UXH8 406 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 TMC5Q6UXY8 1006 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CD300LDQ6UXZ3 194 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 HSDL2Q6YN16 418 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 SLCO4C1Q6ZQN7 724 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 HTR3DQ70Z44 454 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 NLRC3Q7RTR2 1065 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF551Q7Z340 670 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 RTN4RL1Q86UN2 441 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 RAB43Q86YS6 212 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 LIX1LQ8IVB5 337 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 UBQLNLQ8IYU4 475 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 LGI4Q8N135 537 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 TTC9BQ8N6N2 239 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 IL22RA1Q8N6P7 574 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 PROKR2Q8NFJ6 384 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 IL17RDQ8NFM7 739 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 OR56A3Q8NH54 315 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CLHC1Q8NHS4 586 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 FIBINQ8TAL6 211 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 LKAAEAR1Q8TD35 194 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 PPP1R13LQ8WUF5 828 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 KLHL6Q8WZ60 621 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 AP3S1Q92572 193 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 APIPQ96GX9 242 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 FOPNLQ96NB1 174 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CASD1Q96PB1 797 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 MGLLQ99685 303 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 SYT17Q9BSW7 474 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 MND1Q9BWT6 205 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 BOCQ9BWV1 1114 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 GPR62Q9BZJ7 368 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ARHGAP39Q9C0H5 1083 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 PITHD1Q9GZP4 211 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 C6orf62Q9GZU0 229 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 SLC22A4Q9H015 551 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 REEP4Q9H6H4 257 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 NEK6Q9HC98 313 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 MYNNQ9NPC7 610 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ITM2CQ9NQX7 267 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 MARCH5Q9NX47 278 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ZSCAN32Q9NX65 697 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 SPATA7Q9P0W8 599 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 KCND3Q9UK17 655 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 FBXO10Q9UK96 956 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 HS3ST2Q9Y278 367 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 RPL36Q9Y3U8 105 aaKnown RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 KCNE2Q9Y6J6 123 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CENPXA8MT69 81 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 WASH3PC4AMC7 463 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF670-ZNF695F2Z2N8 137 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 F8W810 466 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 FAAHO00519 579 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 KMOO15229 486 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 PROM1O43490 865 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SCO2O43819 266 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 KCNK2O95069 426 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 GJB5O95377 273 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 CLDN7O95471 211 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 CPSF4O95639 269 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 IFNW1P05000 195 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 GALTP07902 379 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ANXA4P09525 319 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 DBTP11182 482 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 OSMP13725 252 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ALOX12P18054 663 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 IDSP22304 550 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 GALP22466 123 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ALAS2P22557 587 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 NR4A1P22736 598 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 TACR1P25103 407 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 CSKP41240 450 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SPINT3P49223 89 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SLC11A1P49279 550 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 CRISP1P54107 249 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ARPP19P56211 112 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 PCBP3P57721 371 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 OR2B6P58173 313 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 PFN3P60673 137 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 LSM3P62310 102 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SPIBQ01892 262 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 EEF1A2Q05639 463 aaKnown RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 MLLT11Q13015 90 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-225ENST00000545920 ASAH1Q13510 395 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 GPR50Q13585 617 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SCARB2Q14108 478 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 DUSP6Q16828 381 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 SYT16Q17RD7 645 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 XKR6Q5GH73 641 aa6.18□□□□□ -1.42
SNHG1-225ENST00000545920 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms