RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CARM1Q86X55 608 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 BEST3Q8N1M1 668 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 DOK4Q8TEW6 326 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 TFGQ92734 400 aaPredicted RBP14.88□□□□□ -0.03
CHD4-210ENST00000544040 MRIQ9BWK5 157 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 DERL2Q9GZP9 239 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 AP1M2Q9Y6Q5 423 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 KIAA0513O60268 411 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 S1PR1P21453 382 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 UGT2B10P36537 528 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 PMS2P3Q13401 168 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 SFRP4Q6FHJ7 346 aaPredicted RBP14.88□□□□□ -0.03
CHD4-210ENST00000544040 CCDC116Q8IYX3 515 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 PLD6Q8N2A8 252 aaKnown RBP14.88□□□□□ -0.03
CHD4-210ENST00000544040 JPH3Q8WXH2 748 aaPredicted RBP14.88□□□□□ -0.03
CHD4-210ENST00000544040 THAP4Q8WY91 577 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 MOCOSQ96EN8 888 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 GMEB2Q9UKD1 530 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 ADH5P11766 374 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 AGTRAPQ6RW13 159 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 C12orf40Q86WS4 652 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 OR8D2Q9GZM6 311 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 FN3KQ9H479 309 aa14.88□□□□□ -0.03
CHD4-210ENST00000544040 SOCS2O14508 198 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 BRINP1O60477 761 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 IL3P08700 152 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 LEPRP48357 1165 aaKnown RBP14.87□□□□□ -0.03
CHD4-210ENST00000544040 GPR139Q6DWJ6 353 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 REEP3Q6NUK4 255 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 LMX1AQ8TE12 382 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 HMX3A6NHT5 357 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 FBP2O00757 339 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 FMO6PO60774 539 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 CFL1P23528 166 aaKnown RBP14.87□□□□□ -0.03
CHD4-210ENST00000544040 EMX2Q04743 252 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 KCNAB2Q13303 367 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 BOLLQ8N9W6 283 aaKnown RBP14.87□□□□□ -0.03
CHD4-210ENST00000544040 TSTD1Q8NFU3 115 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 STK35Q8TDR2 534 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 SCLYQ96I15 445 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 TBCCD1Q9NVR7 557 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 CLEC4EQ9ULY5 219 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 MAP2P11137 1827 aaKnown RBP14.87□□□□□ -0.03
CHD4-210ENST00000544040 ITPRIPL2Q3MIP1 535 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 NANOGP8Q6NSW7 305 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 KLBQ86Z14 1044 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 PSD4Q8NDX1 1056 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 NANOGQ9H9S0 305 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 GOSR2O14653 212 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 EBLN1P0CF75 366 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 ZNF35P13682 527 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 CHMP24386 653 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 DIO3P55073 304 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 TMEM53Q6P2H8 277 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 SHQ1Q6PI26 577 aaKnown RBP14.87□□□□□ -0.03
CHD4-210ENST00000544040 POC1BQ8TC44 478 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 RBP7Q96R05 134 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 NELL2Q99435 816 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 NELFAQ9H3P2 528 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 PTGDR2Q9Y5Y4 395 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 IGLV3-22A0A075B6J6 115 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 DFNA5O60443 496 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 GNSP15586 552 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 GDI1P31150 447 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 MYLK3Q32MK0 819 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 TMEM225Q6GV28 225 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 ASRGL1Q7L266 308 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 SMPDL3AQ92484 453 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 FBXL18Q96ME1 805 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 MTG2Q9H4K7 406 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 SACM1LQ9NTJ5 587 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 TMEM9Q9P0T7 183 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 TEX264Q9Y6I9 313 aa14.87□□□□□ -0.03
CHD4-210ENST00000544040 PRSS51A0A1B0GVH4 220 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 UNC119BA6NIH7 251 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 NDUFS1P28331 727 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 TMBIM6P55061 237 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 SLC36A3Q495N2 470 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 ZSWIM9Q86XI8 627 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 CILP2Q8IUL8 1156 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 GPR22Q99680 433 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 OR2B2Q9GZK3 357 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 PCDHB11Q9Y5F2 797 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 ANKRD66B4E2M5 251 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 HK3P52790 923 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.86□□□□□ -0.03
CHD4-210ENST00000544040 GID4Q8IVV7 300 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 OR51A7Q8NH64 312 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 MYEF2Q9P2K5 600 aaKnown RBP14.86□□□□□ -0.03
CHD4-210ENST00000544040 BCL9O00512 1426 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 SOWAHBA6NEL2 793 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 FHP07954 510 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 CD3GP09693 182 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 SNTA1Q13424 505 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 ATP6AP1Q15904 470 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 NNATQ16517 81 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 PDSS1Q5T2R2 415 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 KIF18BQ86Y91 864 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 IGDCC3Q8IVU1 814 aa14.86□□□□□ -0.03
CHD4-210ENST00000544040 ST6GALNAC4Q9H4F1 302 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms