RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 LKAAEAR1Q8TD35 194 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 DDI1Q8WTU0 396 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 ERLEC1Q96DZ1 483 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 ZC3HAV1LQ96H79 300 aaKnown RBP5.21□□□□□ -1.58
DDB1-219ENST00000541513 LRR1Q96L50 414 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 PANX2Q96RD6 677 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 MTERF1Q99551 399 aaKnown RBP5.21□□□□□ -1.58
DDB1-219ENST00000541513 CPPED1Q9BRF8 314 aaPredicted RBP5.21□□□□□ -1.58
DDB1-219ENST00000541513 TMEM43Q9BTV4 400 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 TDRD1Q9BXT4 1180 aaKnown RBP5.21□□□□□ -1.58
DDB1-219ENST00000541513 ADGRE3Q9BY15 652 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 ACTRT3Q9BYD9 372 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 CUEDC2Q9H467 287 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 CALHM2Q9HA72 323 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 WDR6Q9NNW5 1121 aaKnown RBP5.21□□□□□ -1.58
DDB1-219ENST00000541513 DNAJC4Q9NNZ3 241 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 RNF146Q9NTX7 359 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 RDH8Q9NYR8 311 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 NDUFA13Q9P0J0 144 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 VPS54Q9P1Q0 977 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 ONECUT1Q9UBC0 465 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 RNF14Q9UBS8 474 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 KCNE5Q9UJ90 142 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 FOXJ3Q9UPW0 622 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 RIPK3Q9Y572 518 aa5.21□□□□□ -1.58
DDB1-219ENST00000541513 FRMPD3Q5JV73 1810 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 ESYT2A0FGR8 921 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 HEATR9A2RTY3 570 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 ARHGEF35A5YM69 484 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 OR14I1A6ND48 311 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 BTBD17A6NE02 478 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 TMEM200CA6NKL6 621 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 SUPT3HB4E1H0 165 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 PSMD11O00231 422 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 VCYO14598 125 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 YY2O15391 372 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 SSX4O60224 188 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 LCMT2O60294 686 aaKnown RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 OR10H2O60403 315 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 ZFPL1O95159 310 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 OR5F1O95221 314 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 DEXIO95424 95 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 CTDNEP1O95476 244 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 APOA1P02647 267 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 STAG3L1P0CL83 205 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 CDK4P11802 303 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 CYP2B6P20813 491 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 MSR1P21757 451 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 PAICSP22234 425 aaKnown RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 MPZP25189 248 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 DDX6P26196 483 aaKnown RBP eCLIP5.2□□□□□ -1.58
DDB1-219ENST00000541513 EVI2BP34910 448 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 ME1P48163 572 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 CYP4F2P78329 520 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 SIM1P81133 766 aaPredicted RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 OCA2Q04671 838 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 FPGSQ05932 587 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 DSC1Q08554 894 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 NCBP1Q09161 790 aaKnown RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 CYLC2Q14093 348 aaPredicted RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 SNCBQ16143 134 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 HNRNPA1L2Q32P51 320 aaKnown RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 HIKESHIQ53FT3 197 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 IL23RQ5VWK5 629 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 NIPAL3Q6P499 406 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 MEPCEQ7L2J0 689 aaKnown RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 CTU1Q7Z7A3 348 aaKnown RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 ZNF276Q8N554 614 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 C7orf57Q8NEG2 295 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 OR56A1Q8NGH5 318 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 OR52N4Q8NGI2 321 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 SHKBP1Q8TBC3 707 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 FAM81AQ8TBF8 368 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 TRMT10AQ8TBZ6 339 aaKnown RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 GLYATL2Q8WU03 294 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 CCDC12Q8WUD4 166 aaPredicted RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 GGHQ92820 318 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 P2RX5Q93086 422 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 CIDECQ96AQ7 238 aaPredicted RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 ORAI1Q96D31 301 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 R3HDM4Q96D70 268 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 COQ2Q96H96 371 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 SFXN2Q96NB2 322 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 RPRD1AQ96P16 312 aaPredicted RBP5.2□□□□□ -1.58
DDB1-219ENST00000541513 OR1F2PQ96R84 312 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 OR6C1Q96RD1 312 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 RAB40CQ96S21 281 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 TSG101Q99816 390 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 CITED1Q99966 193 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 BPIFA3Q9BQP9 254 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 ABHD14AQ9BUJ0 271 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 TRIM62Q9BVG3 475 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 KLC2Q9H0B6 622 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 SLC26A1Q9H2B4 701 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 UCK1Q9HA47 277 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 CDH20Q9HBT6 801 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 LRRC4Q9HBW1 653 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 OR14J1Q9UGF5 321 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 FZD10Q9ULW2 581 aa5.2□□□□□ -1.58
DDB1-219ENST00000541513 SATB2Q9UPW6 733 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms