RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CCL26Q9Y258 94 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 CFL2Q9Y281 166 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 GPR52Q9Y2T5 361 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 HCN4Q9Y3Q4 1203 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 CLCA3PQ9Y6N3 262 aa9.89□□□□□ -0.83
CDC42SE1-207ENST00000540998 CENPXA8MT69 81 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 CAPN5O15484 640 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 CPNE3O75131 537 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 IL3P08700 152 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 ALPPL2P10696 532 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 IFI30P13284 250 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 ANXA8P13928 327 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 PRKCAP17252 672 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 ATN1P54259 1190 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 HYAL2Q12891 473 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLBPQ14493 270 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 SYTL3Q4VX76 610 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF544Q6NX49 715 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 CEACAM20Q6UY09 585 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 USP45Q70EL2 814 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF367Q7RTV3 350 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 DENND6BQ8NEG7 585 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 CYB5D2Q8WUJ1 264 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 FCRL1Q96LA6 429 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 YME1L1Q96TA2 773 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLAMF7Q9NQ25 335 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 MKLN1Q9UL63 735 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 A0A1W2PQL4 384 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZAR1LA6NP61 321 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 NOTOA8MTQ0 251 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 ERVH48-1M5A8F1 160 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 TLR4O00206 839 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 MEN1O00255 615 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 AKR7A2O43488 359 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 HNF4AP41235 474 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 TUFMP49411 452 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 HNMTP50135 292 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 GALK2Q01415 458 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 PIN1Q13526 163 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 SPHARQ15513 63 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLC8B1Q6J4K2 584 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF438Q7Z4V0 828 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 RAB43Q86YS6 212 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 RASGEF1AQ8N9B8 481 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 VPS37AQ8NEZ2 397 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 SRRQ9GZT4 340 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 CXorf36Q9H7Y0 433 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 ANKHQ9HCJ1 492 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 CLN6Q9NWW5 311 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 RNF186Q9NXI6 227 aa9.88□□□□□ -0.83
CDC42SE1-207ENST00000540998 A0A1B0GVC2 190 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 A6NIN4 97 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 H7C4K7 107 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 TLX2O43763 284 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 PRKYO43930 277 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CBSLP0DN79 551 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 PAX3P23760 479 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 APEX1P27695 318 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 SDC2P34741 201 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CBSP35520 551 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 SOX18P35713 384 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 TBPL1P62380 186 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 GPLD1P80108 840 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF91Q05481 1191 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 HSPB3Q12988 150 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 SPOUT1Q5T280 376 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 TECPR1Q7Z6L1 1165 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 HORMAD2Q8N7B1 307 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 GPR32P1Q8NGA4 272 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CHTF18Q8WVB6 975 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 PPCDCQ96CD2 204 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 GFM1Q96RP9 751 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 KLK4Q9Y5K2 254 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 A0A0X1KG70 313 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 HEPACAM2A8MVW5 462 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 M0R3H8 397 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 RGS13O14921 159 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 TMCC2O75069 709 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CSF3P09919 207 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 MSL3P1P0C860 447 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 PTPN2P17706 415 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 GABRR2P28476 465 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 ETV5P41161 510 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 ETV1P50549 477 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 RPS25P62851 125 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 PSPHP78330 225 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 EEF1A2Q05639 463 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 MAP4K2Q12851 820 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 IRF5Q13568 498 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CDK10Q15131 360 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 FBXO43Q4G163 708 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 ATAT1Q5SQI0 421 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 C22orf39Q6P5X5 142 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CPA6Q8N4T0 437 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CLP1Q92989 425 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 DIRAS2Q96HU8 199 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms