RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 OR52K2Q8NGK3 314 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 RXFP4Q8TDU9 374 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 LENG9Q96B70 501 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 SLC2A13Q96QE2 648 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 PRR14Q9BWN1 585 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 LATS2Q9NRM7 1088 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 VNN3Q9NY84 501 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 MED11Q9P086 117 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 FBXL21Q9UKT6 434 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 ZNF638Q14966 1978 aaKnown RBP9.07□□□□□ -0.96
CLIP1-214ENST00000540539 BCLAF3A2AJT9 711 aaKnown RBP9.07□□□□□ -0.96
CLIP1-214ENST00000540539 TMEM200CA6NKL6 621 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 WASH3PC4AMC7 463 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 KCNK1O00180 336 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 KIAA0355O15063 1070 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 RECQL4O94761 1208 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 AKR7A3O95154 331 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 MATN4O95460 622 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 HCKP08631 526 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 MIPP30301 263 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 HOXA9P31269 272 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 AVPR1AP37288 418 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 VEGFBP49765 207 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 CLCN3P51790 818 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 NR6A1Q15406 480 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 SF3A2Q15428 464 aaKnown RBP9.07□□□□□ -0.96
CLIP1-214ENST00000540539 DNAJC22Q8N4W6 341 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 C12orf29Q8N999 325 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 PLA2G15Q8NCC3 412 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 CHST13Q8NET6 341 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 GPRC5AQ8NFJ5 357 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 OR4F6Q8NGB9 312 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 FBXO17Q96EF6 278 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 MSLNLQ96KJ4 702 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 KCNJ15Q99712 375 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 TINF2Q9BSI4 451 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 KATNB1Q9BVA0 655 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 POLR1EQ9GZS1 481 aaKnown RBP9.07□□□□□ -0.96
CLIP1-214ENST00000540539 C11orf16Q9NQ32 467 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 PCDHB10Q9UN67 800 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 BTRCQ9Y297 605 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 PCDHB9Q9Y5E1 797 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 PTGDR2Q9Y5Y4 395 aa9.07□□□□□ -0.96
CLIP1-214ENST00000540539 PTPRJQ12913 1337 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 MEIKINA0A087WXM9 373 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 A0A1B0GVI7 797 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 OR6C75A6NL08 312 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 MARCH11A6NNE9 402 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 H7C0S8 307 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 ZNF197O14709 1029 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 TGM5O43548 720 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 MED6O75586 246 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 LBPP18428 481 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 GGT1P19440 569 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 DAPP51397 102 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 CDH6P55285 790 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 EMX2Q04743 252 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 MXD1Q05195 221 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 MBTD1Q05BQ5 628 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 P2RY14Q15391 338 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 SFRP5Q5T4F7 317 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 RAET1GQ6H3X3 334 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 DDX53Q86TM3 631 aaKnown RBP9.06□□□□□ -0.96
CLIP1-214ENST00000540539 THEM5Q8N1Q8 247 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 ATPAF2Q8N5M1 289 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 CHST14Q8NCH0 376 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 OR10H5Q8NGA6 315 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 OR2T35Q8NGX2 323 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 POC1BQ8TC44 478 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 SCARB1Q8WTV0 552 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 CNOT9Q92600 299 aaKnown RBP9.06□□□□□ -0.96
CLIP1-214ENST00000540539 GGHQ92820 318 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 OTULINQ96BN8 352 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 ACCSQ96QU6 501 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 MRPL57Q9BQC6 102 aaKnown RBP9.06□□□□□ -0.96
CLIP1-214ENST00000540539 RNF32Q9H0A6 362 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 OPN3Q9H1Y3 402 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-214ENST00000540539 OR51J1Q9H342 316 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 R3HDMLQ9H3Y0 253 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 SUV39H2Q9H5I1 410 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 SDR39U1Q9NRG7 319 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-214ENST00000540539 GPR83Q9NYM4 423 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 ARHGAP28Q9P2N2 729 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 LIMD1Q9UGP4 676 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 EIF2B4Q9UI10 523 aaKnown RBP9.06□□□□□ -0.96
CLIP1-214ENST00000540539 SCP2D1Q9UJQ7 156 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 EXO1Q9UQ84 846 aaKnown RBP9.06□□□□□ -0.96
CLIP1-214ENST00000540539 CEP350Q5VT06 3117 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 ARID2Q68CP9 1835 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 ARHGEF33A8MVX0 844 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 M0QYV0 167 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 KPNA3O00505 521 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-214ENST00000540539 SCAMP2O15127 329 aaKnown RBP9.06□□□□□ -0.96
CLIP1-214ENST00000540539 SLC25A27O95847 323 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 S1PR4O95977 384 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 POLBP06746 335 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 MLNP12872 115 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 ERCC2P18074 760 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 MAGEA2P43356 314 aa9.06□□□□□ -0.96
CLIP1-214ENST00000540539 STAT5BP51692 787 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms