RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RBPMSQ93062 196 aaKnown RBP12.07□□□□□ -0.48
DDX55-206ENST00000539934 IGSF8Q969P0 613 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 OXNAD1Q96HP4 312 aaPredicted RBP12.07□□□□□ -0.48
DDX55-206ENST00000539934 CCDC74BQ96LY2 380 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 TRNT1Q96Q11 434 aaKnown RBP12.07□□□□□ -0.48
DDX55-206ENST00000539934 ERVK-6Q9BXR3 956 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 ROGDIQ9GZN7 287 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 OPA3Q9H6K4 179 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 PLSCR4Q9NRQ2 329 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 RBM22Q9NW64 420 aaKnown RBP eCLIP12.07□□□□□ -0.483e-13■■■■■ 30.2
DDX55-206ENST00000539934 SDHAF2Q9NX18 166 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 ERVK-18Q9QC07 812 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 MTO1Q9Y2Z2 717 aaKnown RBP12.07□□□□□ -0.48
DDX55-206ENST00000539934 YIPF1Q9Y548 306 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 PCDHGC4Q9Y5F7 938 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 PCDHGB6Q9Y5F9 930 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 PCDHGB2Q9Y5G2 931 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 PCDHGA7Q9Y5G6 932 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 PCDHGA6Q9Y5G7 932 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 PCDHGA5Q9Y5G8 931 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 NUBP2Q9Y5Y2 271 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 RNF215Q9Y6U7 377 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 MIA3Q5JRA6 1907 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 IGLV3-10A0A075B6K4 115 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 PRRG1O14668 218 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 ANXA9O76027 345 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 SERPINA5P05154 406 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 MATN1P21941 496 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 MEF2AQ02078 507 aaPredicted RBP12.07□□□□□ -0.48
DDX55-206ENST00000539934 TBCCQ15814 346 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 RFX4Q33E94 735 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 RNF212Q495C1 297 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 SPANXN3Q5MJ09 141 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 C6orf52Q5T4I8 152 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 TSSK4Q6SA08 328 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 CYS1Q717R9 158 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 LUZP2Q86TE4 346 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 CEP97Q8IW35 865 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 UNC5BQ8IZJ1 945 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 MAML2Q8IZL2 1156 aaPredicted RBP12.07□□□□□ -0.48
DDX55-206ENST00000539934 NANOGP1Q8N7R0 232 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 OR5T1Q8NG75 326 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 OR6Q1Q8NGQ2 317 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 SPATA22Q8NHS9 363 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 NR4A3Q92570 626 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 OTUB2Q96DC9 234 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 MTERF3Q96E29 417 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 C14orf144Q96I85 54 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 SERAC1Q96JX3 654 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 FCRL5Q96RD9 977 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 WDR77Q9BQA1 342 aaPredicted RBP12.07□□□□□ -0.48
DDX55-206ENST00000539934 TAS2R3Q9NYW6 316 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 WNT16Q9UBV4 365 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 MLXQ9UH92 298 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 MGAT4BQ9UQ53 548 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 IRAK3Q9Y616 596 aa12.07□□□□□ -0.48
DDX55-206ENST00000539934 ZNF840PA6NDX5 716 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 F5H5T6 163 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 MT-CYBP00156 380 aaPredicted RBP12.06□□□□□ -0.48
DDX55-206ENST00000539934 OTCP00480 354 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 HLA-DQB2P05538 268 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 SNRNP70P08621 437 aaKnown RBP12.06□□□□□ -0.48
DDX55-206ENST00000539934 CHRM3P20309 590 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 GPR143P51810 404 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 SLC1A5Q15758 541 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 KCNMB1Q16558 191 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 LPAL2Q16609 132 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 RABGAP1LQ5R372 815 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 TIGD3Q6B0B8 471 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 CES3Q6UWW8 571 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 CIR1Q86X95 450 aaPredicted RBP12.06□□□□□ -0.48
DDX55-206ENST00000539934 TCTE3Q8IZS6 198 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 BANPQ8N9N5 519 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 WDSUB1Q8N9V3 476 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 ZNF597Q96LX8 424 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 DUSP15Q9H1R2 295 aaPredicted RBP12.06□□□□□ -0.48
DDX55-206ENST00000539934 SEPSECSQ9HD40 501 aaKnown RBP12.06□□□□□ -0.48
DDX55-206ENST00000539934 CATSPERZQ9NTU4 200 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 SPHK1Q9NYA1 384 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 PPP4R1LQ9P1A2 415 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 NCDNQ9UBB6 729 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 CELSR3Q9NYQ7 3312 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 MPTX1A8MV57 137 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 KRBOX1C9JBD0 128 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 DVL2O14641 736 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 TGM5O43548 720 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 RAMP2O60895 175 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 LINC00614P0C842 121 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 ERVK-10P10266 1014 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 HMGA1P17096 107 aaKnown RBP12.06□□□□□ -0.48
DDX55-206ENST00000539934 TACR2P21452 398 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 PSMD8P48556 350 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 CSNK1DP48730 415 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 GEMP55040 296 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 CDH13P55290 713 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 SLC13A2Q13183 592 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 ZNHIT3Q15649 155 aaPredicted RBP12.06□□□□□ -0.48
DDX55-206ENST00000539934 SMAD1Q15797 465 aaKnown RBP12.06□□□□□ -0.48
DDX55-206ENST00000539934 SLC36A3Q495N2 470 aa12.06□□□□□ -0.48
DDX55-206ENST00000539934 CLLU1Q5K131 121 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms