RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ARL14Q8N4G2 192 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 RELL2Q8NC24 303 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ANKRD20A12PQ8NF67 263 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SYN2Q92777 582 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 RIT1Q92963 219 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PHF21AQ96BD5 680 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SLC25A36Q96CQ1 311 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 NDUFAF3Q9BU61 184 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CARD9Q9H257 536 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 EVA1AQ9H8M9 152 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 AKIRIN1Q9H9L7 192 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CALHM2Q9HA72 323 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 UPF2Q9HAU5 1272 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 BARHL2Q9NY43 387 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ELOVL5Q9NYP7 299 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CTNNA3Q9UI47 895 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 VDAC3Q9Y277 283 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 AHDC1Q5TGY3 1603 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ACEP12821 1306 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 VIRMAQ69YN4 1812 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SH3PXD2BA1X283 911 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM89A2RUT3 159 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RNF222A6NCQ9 220 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 C4orf47A7E2U8 309 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 FRAT2O75474 233 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF821O75541 412 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 UGT2B17O75795 530 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TSHBP01222 138 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CSF2P04141 144 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TRIM49P0CI25 452 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TRIM49CP0CI26 452 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PTMSP20962 102 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PAX7P23759 505 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RFC2P35250 354 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TRIM23P36406 574 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 MDH1P40925 334 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 MATKP42679 507 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SLC26A5P58743 744 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 HERVK_113P63132 956 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ERVK-8P63133 956 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RIPK1Q13546 671 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 OPCMLQ14982 345 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CEBPEQ15744 281 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 GPR33Q49SQ1 333 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 XKR9Q5GH70 373 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 UTF1Q5T230 341 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 KRT39Q6A163 491 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RAB12Q6IQ22 244 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 NIPAL3Q6P499 406 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 FAM171BQ6P995 826 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF613Q6PF04 617 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PRSS57Q6UWY2 283 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CWC27Q6UX04 472 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 COLCA1Q6ZS62 124 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RUFY3Q7L099 469 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TIPARPQ7Z3E1 657 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PTOV1Q86YD1 416 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 KLHDC9Q8NEP7 349 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 OR10A7Q8NGE5 316 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 HPSE2Q8WWQ2 592 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ULK4Q96C45 1275 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 FAM122AQ96E09 287 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 MRPL53Q96EL3 112 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 STAMBPL1Q96FJ0 436 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 IL12RB2Q99665 862 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ERVK-6Q9BXR3 956 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CCSER1Q9C0I3 900 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ILKAPQ9H0C8 392 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 MMP28Q9H239 520 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 THAP9Q9H5L6 903 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SRD5A3Q9H8P0 318 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 GKN1Q9NS71 199 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SLC38A7Q9NVC3 462 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 THYN1Q9P016 225 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ARMCX3Q9UH62 379 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PURGQ9UJV8 347 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ITM2BQ9Y287 266 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PPP2R2CQ9Y2T4 447 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC7Q96M83 1385 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 GLI2P10070 1586 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 XIRP1Q702N8 1843 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 A0A087WYN8 130 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ZSCAN5CA6NGD5 496 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CD8B2A6NJW9 211 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RNF212BA8MTL3 300 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TCP10L2B9ZVM9 353 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ANHXE9PGG2 379 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 H3BTX0 84 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TNFSF12O43508 249 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 LRP3O75074 770 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 BMP10O95393 424 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 HOXB7P09629 217 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 EPHA2P29317 976 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RBMS1P29558 406 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PKLRP30613 574 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SRD5A2P31213 254 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RFC4P35249 363 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PSMC4P43686 418 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ENTPD1P49961 510 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 LINC01547P58512 204 aaPredicted RBP0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms