RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 CLEC3AO75596 197 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 IFNA14P01570 189 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 ZNF182P17025 639 aaPredicted RBP13.33□□□□□ -0.28
LIMK1-208ENST00000538333 PKLRP30613 574 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 XCR1P46094 333 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 GSTM5P46439 218 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 LIMS1P48059 325 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 ALDH9A1P49189 494 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 MANFP55145 182 aaKnown RBP13.33□□□□□ -0.28
LIMK1-208ENST00000538333 HYAL1Q12794 435 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 CYP27C1Q4G0S4 372 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 ARMC8Q8IUR7 673 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 PLD3Q8IV08 490 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 ENTHD1Q8IYW4 607 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 RAB42Q8N4Z0 105 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 SLC5A8Q8N695 610 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 HORMAD2Q8N7B1 307 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 OR10G2Q8NGC3 310 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 TBC1D15Q8TC07 691 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 APH1BQ8WW43 257 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 TEFMQ96QE5 360 aaKnown RBP13.33□□□□□ -0.28
LIMK1-208ENST00000538333 SIGLEC11Q96RL6 698 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 RHNO1Q9BSD3 238 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.28
LIMK1-208ENST00000538333 SLC17A9Q9BYT1 436 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 CCDC90BQ9GZT6 254 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 NKX2-4Q9H2Z4 354 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 RMI1Q9H9A7 625 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 IMP3Q9NV31 184 aaKnown RBP13.33□□□□□ -0.28
LIMK1-208ENST00000538333 RLIMQ9NVW2 624 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 PSME2Q9UL46 239 aa13.33□□□□□ -0.28
LIMK1-208ENST00000538333 A0A0A6YYD5 115 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 PRR23AA6NEV1 266 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 A8MVJ9 347 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 ZNF99A8MXY4 864 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-208ENST00000538333 J3KTA2 159 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 PRICKLE3O43900 615 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-208ENST00000538333 ITGA2P17301 1181 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 KRT20P35900 424 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 ENTPD1P49961 510 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 CDH12P55289 794 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 RPS26P62854 115 aaKnown RBP13.32□□□□□ -0.28
LIMK1-208ENST00000538333 SPIBQ01892 262 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 SGCGQ13326 291 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 NPTX1Q15818 432 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 MICAQ29983 383 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 REEP3Q6NUK4 255 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 CEACAM20Q6UY09 585 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 SMYD1Q8NB12 490 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 OR2L8Q8NGY9 312 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 OR14C36Q8NHC7 312 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 APOBEC4Q8WW27 367 aaKnown RBP13.32□□□□□ -0.28
LIMK1-208ENST00000538333 THAP11Q96EK4 314 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 A4GALTQ9NPC4 353 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 ENPP5Q9UJA9 477 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 RAB23Q9ULC3 237 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 SZT2Q5T011 3432 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 MDC1Q14676 2089 aaKnown RBP13.32□□□□□ -0.28
LIMK1-208ENST00000538333 NINQ8N4C6 2090 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 LRIT2A6NDA9 550 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 OR52A4PA6NMU1 304 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 RFXAPO00287 272 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 AXIN1O15169 862 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 PPM1DO15297 605 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 FOXD2O60548 495 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-208ENST00000538333 NDUFS2O75306 463 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 ANXA8P13928 327 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 FUT4P22083 530 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 MASP1P48740 699 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 HMGA2P52926 109 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 ADPRHP54922 357 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 DUSP7Q16829 419 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 EXOC3L2Q2M3D2 409 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 PPP2R2DQ66LE6 453 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 GPR153Q6NV75 609 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 EP400NLQ6ZTU2 488 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 ANKRD13BQ86YJ7 626 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 OR52J3Q8NH60 311 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 PSMA8Q8TAA3 256 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 SLC38A5Q8WUX1 472 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 UCN3Q969E3 161 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 KCNC2Q96PR1 638 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 GABRG3Q99928 467 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 RSPO3Q9BXY4 272 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-208ENST00000538333 SLC6A17Q9H1V8 727 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 RASSF1Q9NS23 344 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 ACER3Q9NUN7 267 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 SCN3BQ9NY72 215 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 TAS2R7Q9NYW3 318 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 SNX11Q9Y5W9 270 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 ENPP4Q9Y6X5 453 aa13.32□□□□□ -0.28
LIMK1-208ENST00000538333 CEP290O15078 2479 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 TRBC2A0A5B9 178 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 KCNJ13O60928 360 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 INHBBP09529 407 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 TRA2BP62995 288 aaKnown RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 BNIP3Q12983 259 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 HSPB3Q12988 150 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 AQP6Q13520 282 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms