RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 SMIM23A6NLE4 172 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 HRKO00198 91 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 FOXE1O00358 373 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 PGRMC2O15173 223 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 PROM1O43490 865 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 PLIN3O60664 434 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ZNF354AO60765 605 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 CTNSO60931 367 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 LDB3O75112 727 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 SMIM24O75264 130 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 DDAH2O95865 285 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 GBAP04062 536 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ALPPP05187 535 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 GSTA1P08263 222 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 NUDT17P0C025 328 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 RNF224P0DH78 156 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 IMPDH1P20839 514 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ATP5F1P24539 256 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 PTX3P26022 381 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 CRHR1P34998 444 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 SOX18P35713 384 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 CCNG1P51959 295 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 FOXA1P55317 472 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 HERVK_113P63132 956 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 IGLV3-21P80748 117 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 KCNC4Q03721 635 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 CLCQ05315 142 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ACTN3Q08043 901 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 GALNT1Q10472 559 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 TBL3Q12788 808 aaKnown RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 SLAMF1Q13291 335 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 MRPL49Q13405 166 aaKnown RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 CUL3Q13618 768 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 HIST2H2ACQ16777 129 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 GGTA1PQ4G0N0 100 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ACER2Q5QJU3 275 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 LGSNQ5TDP6 509 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 FRG2Q64ET8 278 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ZNF324BQ6AW86 544 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 HIST2H2AA3Q6FI13 130 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 NIPAL1Q6NVV3 410 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 TRIM40Q6P9F5 258 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 MYLK4Q86YV6 388 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 OR4N5Q8IXE1 308 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 MMP21Q8N119 569 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ARMC10Q8N2F6 343 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ZCCHC7Q8N3Z6 543 aaKnown RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 ZADH2Q8N4Q0 377 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 DNAJB14Q8TBM8 379 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 TRPC4APQ8TEL6 797 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 DOK4Q8TEW6 326 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 PTPMT1Q8WUK0 201 aaPredicted RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.85□□□□□ -1.15
SPARC-208ENST00000538026 UBE2E3Q969T4 207 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 RGMAQ96B86 450 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 FAR2Q96K12 515 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 SIGLEC12Q96PQ1 595 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 FRG2BQ96QU4 278 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 KCNA7Q96RP8 456 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 HBEGFQ99075 208 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ERVK-6Q9BXR3 956 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 PARD6BQ9BYG5 372 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 DDX31Q9H8H2 851 aaKnown RBP7.85□□□□□ -1.15
SPARC-208ENST00000538026 PRTFDC1Q9NRG1 225 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 STMN3Q9NZ72 180 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 VTI1BQ9UEU0 232 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 FBXW2Q9UKT8 454 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 RAB21Q9UL25 225 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 TMCO1Q9UM00 188 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 MMACHCQ9Y4U1 282 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 ANGPTL3Q9Y5C1 460 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 PCDHGA11Q9Y5H2 935 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 CSMD2Q7Z408 3487 aa7.85□□□□□ -1.15
SPARC-208ENST00000538026 MED12Q93074 2177 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 ARHGAP10A1A4S6 786 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 PSMD12O00232 456 aaPredicted RBP7.84□□□□□ -1.15
SPARC-208ENST00000538026 FGF17O60258 216 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 NEURL1O76050 574 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 MYO1DO94832 1006 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 OR4F21O95013 312 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 CBX6O95503 412 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 PDYNP01213 254 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 CLPSP04118 112 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 ICAM2P13598 275 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 GNLYP22749 145 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 JAK1P23458 1154 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 TPP2P29144 1249 aaPredicted RBP7.84□□□□□ -1.15
SPARC-208ENST00000538026 SERPINB1P30740 379 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 CD96P40200 585 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 TSFMP43897 325 aaKnown RBP7.84□□□□□ -1.15
SPARC-208ENST00000538026 HTR6P50406 440 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 HSD17B7P56937 341 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 RAE1P78406 368 aaKnown RBP7.84□□□□□ -1.15
SPARC-208ENST00000538026 ZNF33BQ06732 778 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 TUBA3CQ13748 450 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 ZNF169Q14929 603 aaPredicted RBP7.84□□□□□ -1.15
SPARC-208ENST00000538026 EXT1Q16394 746 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 SGO1Q5FBB7 561 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 CES4AQ5XG92 561 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 TUBA3EQ6PEY2 450 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms