RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 COLEC12Q5KU26 742 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 COMMD6Q7Z4G1 85 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 MMP21Q8N119 569 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 ANKRD42Q8N9B4 389 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 METTL21AQ8WXB1 218 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 ANKRD9Q96BM1 317 aaPredicted RBP16.78■□□□□ 0.28
DDX55-204ENST00000536079 APIPQ96GX9 242 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 ADNPQ9H2P0 1102 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 TUBB1Q9H4B7 451 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 ZBTB20Q9HC78 741 aaPredicted RBP16.78■□□□□ 0.28
DDX55-204ENST00000536079 PRTFDC1Q9NRG1 225 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 KALRNO60229 2985 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 NSG1A0A0A6YYJ2 146 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 TCRBV16S1A1N1A0A5B0 115 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 TMEM120BA0PK00 339 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 TM9SF1O15321 606 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 PROM1O43490 865 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 LDB3O75112 727 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 LYPLA1O75608 230 aaPredicted RBP16.77■□□□□ 0.28
DDX55-204ENST00000536079 CYC1P08574 325 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 FAM58BPP0C7Q3 252 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 CPN2P22792 545 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 TSFMP43897 325 aaKnown RBP16.77■□□□□ 0.28
DDX55-204ENST00000536079 ARFIP1P53367 373 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 SOX8P57073 446 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 OR4D2P58180 307 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 NAA20P61599 178 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 RAE1P78406 368 aaKnown RBP16.77■□□□□ 0.28
DDX55-204ENST00000536079 AIMP2Q13155 320 aaKnown RBP16.77■□□□□ 0.28
DDX55-204ENST00000536079 RCN2Q14257 317 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 UGT3A2Q3SY77 523 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 TTMPQ5BVD1 217 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 C10orf62Q5T681 223 aaPredicted RBP16.77■□□□□ 0.28
DDX55-204ENST00000536079 GPR180Q86V85 440 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 NUDCD3Q8IVD9 361 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 OR4N5Q8IXE1 308 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 C1orf52Q8N6N3 182 aaKnown RBP16.77■□□□□ 0.28
DDX55-204ENST00000536079 EFCAB3Q8N7B9 438 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 CLEC1AQ8NC01 280 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 C9orf43Q8TAL5 461 aaPredicted RBP16.77■□□□□ 0.28
DDX55-204ENST00000536079 CHTF18Q8WVB6 975 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 CENPKQ9BS16 269 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 SLC25A23Q9BV35 468 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 C20orf27Q9GZN8 174 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 ZNF552Q9H707 407 aaPredicted RBP16.77■□□□□ 0.28
DDX55-204ENST00000536079 TEX10Q9NXF1 929 aaPredicted RBP16.77■□□□□ 0.28
DDX55-204ENST00000536079 FIS1Q9Y3D6 152 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 MMACHCQ9Y4U1 282 aa16.77■□□□□ 0.28
DDX55-204ENST00000536079 FAM208BQ5VWN6 2430 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 A0A1W2PS29 197 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 SERTM1A2A2V5 107 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 GLOD5A6NK44 160 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 ZWINTO95229 277 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 ITGAMP11215 1152 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 BGNP21810 368 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 ITGA3P26006 1051 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 BTKQ06187 659 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 CSTF3Q12996 717 aaKnown RBP16.76■□□□□ 0.27
DDX55-204ENST00000536079 SLC13A2Q13183 592 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 CHI3L2Q15782 390 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 KANK2Q63ZY3 851 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 PAPD4Q6PIY7 484 aaKnown RBP16.76■□□□□ 0.27
DDX55-204ENST00000536079 HDXQ7Z353 690 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 NUDT13Q86X67 352 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 ZNF595Q8IYB9 648 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 LSM14AQ8ND56 463 aaKnown RBP16.76■□□□□ 0.27
DDX55-204ENST00000536079 AGR3Q8TD06 166 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 MGARPQ8TDB4 240 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 PSMF1Q92530 271 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 THOC3Q96J01 351 aaKnown RBP16.76■□□□□ 0.27
DDX55-204ENST00000536079 SLC25A18Q9H1K4 315 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 GPR83Q9NYM4 423 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 VPS29Q9UBQ0 182 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 ZDHHC2Q9UIJ5 367 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 TUBD1Q9UJT1 453 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 CCL27Q9Y4X3 112 aa16.76■□□□□ 0.27
DDX55-204ENST00000536079 TNRC6AQ8NDV7 1962 aaKnown RBP16.75■□□□□ 0.27
DDX55-204ENST00000536079 MKRN2OSH3BPM6 223 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 AZIN1O14977 448 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 PGRMC2O15173 223 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 FGF17O60258 216 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 CTNSO60931 367 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 AIFM1O95831 613 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 PRR35P0CG20 571 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 UROSP10746 265 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 HSD3B1P14060 373 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 HSD3B2P26439 372 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 HSD17B7P56937 341 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 TNFRSF17Q02223 184 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 ASPHQ12797 758 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 MYBPC3Q14896 1274 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 CCNYL2Q5T2Q4 361 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 AGBL2Q5U5Z8 902 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 CYP20A1Q6UW02 462 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 TRIM46Q7Z4K8 759 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 NFAM1Q8NET5 270 aaPredicted RBP16.75■□□□□ 0.27
DDX55-204ENST00000536079 OR2T11Q8NH01 316 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 ADAMTS18Q8TE60 1221 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 C11orf24Q96F05 449 aaPredicted RBP16.75■□□□□ 0.27
DDX55-204ENST00000536079 SH3GL2Q99962 352 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms