RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 PHF11Q9UIL8 331 aa12.91□□□□□ -0.34
TMEM258-203ENST00000535297 PPIEQ9UNP9 301 aaKnown RBP12.91□□□□□ -0.34
TMEM258-203ENST00000535297 PTPN13Q12923 2485 aa12.91□□□□□ -0.34
TMEM258-203ENST00000535297 ASH1LQ9NR48 2969 aaKnown RBP12.9□□□□□ -0.34
TMEM258-203ENST00000535297 A8MUA0 341 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 GOLGA8RI6L899 631 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 PRAMEF2O60811 474 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 GLRA3O75311 464 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 MYO1DO94832 1006 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 F10P00742 488 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 SHBGP04278 402 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 PYGBP11216 843 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 CPN2P22792 545 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 ATP5F1P24539 256 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-203ENST00000535297 SERTAD2Q14140 314 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 NR6A1Q15406 480 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 ELAVL1Q15717 326 aaKnown RBP12.9□□□□□ -0.34
TMEM258-203ENST00000535297 FRG2Q64ET8 278 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 TTC19Q6DKK2 380 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-203ENST00000535297 FAM180AQ6UWF9 173 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 MILR1Q7Z6M3 343 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 CLNKQ7Z7G1 428 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 NUDT13Q86X67 352 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 SLC22A9Q8IVM8 553 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 ARMC10Q8N2F6 343 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 KIF2BQ8N4N8 673 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 FAM26EQ8N5C1 309 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 APCDD1LQ8NCL9 501 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 MYRIPQ8NFW9 859 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 OR4F6Q8NGB9 312 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 GRHL3Q8TE85 626 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 VMP1Q96GC9 406 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 FRG2BQ96QU4 278 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 SERPINI1Q99574 410 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 UTP23Q9BRU9 249 aaKnown RBP12.9□□□□□ -0.34
TMEM258-203ENST00000535297 SORBS1Q9BX66 1292 aaKnown RBP12.9□□□□□ -0.34
TMEM258-203ENST00000535297 ZNF717Q9BY31 904 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-203ENST00000535297 PNO1Q9NRX1 252 aaKnown RBP12.9□□□□□ -0.34
TMEM258-203ENST00000535297 LYARQ9NX58 379 aaKnown RBP12.9□□□□□ -0.34
TMEM258-203ENST00000535297 TRPS1Q9UHF7 1281 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 DCDC2Q9UHG0 476 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 FBXW2Q9UKT8 454 aa12.9□□□□□ -0.34
TMEM258-203ENST00000535297 USP9XQ93008 2570 aaPredicted RBP12.89□□□□□ -0.35
TMEM258-203ENST00000535297 RELNP78509 3460 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 A0A0A6YYD5 115 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 GABRR3A8MPY1 467 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 DLX3O60479 287 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 ETHE1O95571 254 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 PPP2R1BP30154 601 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 BSGP35613 385 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 CLCN2P51788 898 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 NEK2P51955 445 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 TNFRSF17Q02223 184 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 CLCQ05315 142 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 STX4Q12846 297 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 IFT88Q13099 833 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 SLAMF1Q13291 335 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 MRPL49Q13405 166 aaKnown RBP12.89□□□□□ -0.35
TMEM258-203ENST00000535297 TUBA3CQ13748 450 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 UBAP2LQ14157 1087 aaKnown RBP12.89□□□□□ -0.35
TMEM258-203ENST00000535297 ZNF678Q5SXM1 525 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 TUBA3EQ6PEY2 450 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 GPR180Q86V85 440 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 RPS19BP1Q86WX3 136 aaKnown RBP12.89□□□□□ -0.35
TMEM258-203ENST00000535297 TMEM132CQ8N3T6 1108 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 BCORP1Q8N888 145 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 ST6GALNAC3Q8NDV1 305 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 FAR1Q8WVX9 515 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 DAZLQ92904 295 aaKnown RBP12.89□□□□□ -0.35
TMEM258-203ENST00000535297 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 ALOXE3Q9BYJ1 711 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 DEFB126Q9BYW3 111 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 ELOVL6Q9H5J4 265 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 CDCP1Q9H5V8 836 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 DDX31Q9H8H2 851 aaKnown RBP12.89□□□□□ -0.35
TMEM258-203ENST00000535297 VTI1BQ9UEU0 232 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 STK38LQ9Y2H1 464 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 PCDHGB6Q9Y5F9 930 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 HIVEP3Q5T1R4 2406 aa12.89□□□□□ -0.35
TMEM258-203ENST00000535297 DOPEY2Q9Y3R5 2298 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 TRBV11-1A0A0K0K1C0 115 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 MAN1A2O60476 641 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 LDB3O75112 727 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 CDH16O75309 829 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 SLU7O95391 586 aaKnown RBP12.88□□□□□ -0.35
TMEM258-203ENST00000535297 CBX6O95503 412 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 IFNA16P05015 189 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 KRT15P19012 456 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 TLX1P31314 330 aaPredicted RBP12.88□□□□□ -0.35
TMEM258-203ENST00000535297 HSD17B3P37058 310 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 BUD31P41223 144 aaPredicted RBP12.88□□□□□ -0.35
TMEM258-203ENST00000535297 SLCO1A2P46721 670 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 GPR143P51810 404 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 PRKAA2P54646 552 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 CDH13P55290 713 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 HNRNPH2P55795 449 aaKnown RBP12.88□□□□□ -0.35
TMEM258-203ENST00000535297 MLF1P58340 268 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 VSNL1P62760 191 aa12.88□□□□□ -0.35
TMEM258-203ENST00000535297 IGLV3-21P80748 117 aaPredicted RBP12.88□□□□□ -0.35
TMEM258-203ENST00000535297 BIKQ13323 160 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms