RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 EXTL1Q92935 676 aa22.75■■□□□ 1.23
SIPA1-210ENST00000534406 TSLPQ969D9 159 aa22.75■■□□□ 1.23
SIPA1-210ENST00000534406 C8orf44Q96CB5 159 aa22.75■■□□□ 1.23
SIPA1-210ENST00000534406 DNAJC15Q9Y5T4 150 aa22.75■■□□□ 1.23
SIPA1-210ENST00000534406 NBEAQ8NFP9 2946 aa22.75■■□□□ 1.23
SIPA1-210ENST00000534406 ATMQ13315 3056 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 LOC102723996A0A087X1L8 192 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 A0A1W2PQ72 361 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 BLACEA4D250 179 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 SLC28A1O00337 649 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 RSL1D1O76021 490 aaKnown RBP22.74■■□□□ 1.23
SIPA1-210ENST00000534406 GBAP04062 536 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 FAM58BPP0C7Q3 252 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 TPP2P29144 1249 aaPredicted RBP22.74■■□□□ 1.23
SIPA1-210ENST00000534406 BUD31P41223 144 aaPredicted RBP22.74■■□□□ 1.23
SIPA1-210ENST00000534406 HNRNPFP52597 415 aaKnown RBP22.74■■□□□ 1.23
SIPA1-210ENST00000534406 MAPK12P53778 367 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 BST1Q10588 318 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 NSDHLQ15738 373 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 SPDYAQ5MJ70 313 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 CCNYL2Q5T2Q4 361 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 LANCL3Q6ZV70 420 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 APLFQ8IW19 511 aaPredicted RBP22.74■■□□□ 1.23
SIPA1-210ENST00000534406 SCUBE1Q8IWY4 988 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 KIRREL3Q8IZU9 778 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 TMEM52Q8NDY8 209 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 CHTF18Q8WVB6 975 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 PTCHD1Q96NR3 888 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 MESP1Q9BRJ9 268 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 PRTFDC1Q9NRG1 225 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 ZDHHC2Q9UIJ5 367 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 PTGDR2Q9Y5Y4 395 aa22.74■■□□□ 1.23
SIPA1-210ENST00000534406 MED13Q9UHV7 2174 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 IGKV3D-11A0A0A0MRZ8 115 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 NR2F6P10588 404 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 COX6A1P12074 109 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 MAOAP21397 527 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 TLX1P31314 330 aaPredicted RBP22.73■■□□□ 1.23
SIPA1-210ENST00000534406 HSD17B7P56937 341 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 PPP2R2AP63151 447 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 BTG2P78543 158 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 CHAF1BQ13112 559 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 SLC13A2Q13183 592 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 DCAF10Q5QP82 559 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 ATG16L1Q676U5 607 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 ANKRD37Q7Z713 158 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 DDIASQ8IXT1 998 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 TTC9Q92623 222 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 APIPQ96GX9 242 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 ILKAPQ9H0C8 392 aaPredicted RBP22.73■■□□□ 1.23
SIPA1-210ENST00000534406 ING2Q9H160 280 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 TUBB1Q9H4B7 451 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 ZNF395Q9H8N7 513 aaPredicted RBP22.73■■□□□ 1.23
SIPA1-210ENST00000534406 RIC8BQ9NVN3 520 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 RAP2CQ9Y3L5 183 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 ATG4BQ9Y4P1 393 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 ASB4Q9Y574 426 aa22.73■■□□□ 1.23
SIPA1-210ENST00000534406 RGS14O43566 566 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 PCDH7O60245 1069 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 HPP00738 406 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 BTKQ06187 659 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 UGT3A2Q3SY77 523 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 CPEB2Q7Z5Q1 589 aaKnown RBP22.72■■□□□ 1.23
SIPA1-210ENST00000534406 CLEC1AQ8NC01 280 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 SORT1Q99523 831 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 C20orf27Q9GZN8 174 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 WDR41Q9HAD4 459 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 MCM8Q9UJA3 840 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.72■■□□□ 1.23
SIPA1-210ENST00000534406 ZFYVE26Q68DK2 2539 aa22.72■■□□□ 1.23
SIPA1-210ENST00000534406 IGHV1-45A0A0A0MS14 117 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 NSG1A0A0A6YYJ2 146 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 ERVH48-1M5A8F1 160 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 PIP5K1BO14986 540 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 GUCY1B2O75343 617 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 AIFM1O95831 613 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 TIA1P31483 386 aaKnown RBP eCLIP22.71■■□□□ 1.23
SIPA1-210ENST00000534406 PCOLCEQ15113 449 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 NR6A1Q15406 480 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 C18orf63Q68DL7 685 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 NDUFAF7Q7L592 441 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 CLNKQ7Z7G1 428 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 ZNF781Q8N8C0 355 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 ARHGAP9Q9BRR9 750 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 ZNF700Q9H0M5 742 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 RPF2Q9H7B2 306 aaKnown RBP22.71■■□□□ 1.23
SIPA1-210ENST00000534406 MANSC1Q9H8J5 431 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 NECTIN3Q9NQS3 549 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 HAO1Q9UJM8 370 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 CCL27Q9Y4X3 112 aa22.71■■□□□ 1.23
SIPA1-210ENST00000534406 A0A1W2PR48 441 aa22.7■■□□□ 1.22
SIPA1-210ENST00000534406 TCRBV16S1A1N1A0A5B0 115 aa22.7■■□□□ 1.22
SIPA1-210ENST00000534406 SYNDIG1LA6NDD5 238 aa22.7■■□□□ 1.22
SIPA1-210ENST00000534406 NPIPB8E9PQR5 432 aa22.7■■□□□ 1.22
SIPA1-210ENST00000534406 PROM1O43490 865 aa22.7■■□□□ 1.22
SIPA1-210ENST00000534406 ATP8B1O43520 1251 aa22.7■■□□□ 1.22
SIPA1-210ENST00000534406 SKAP2O75563 359 aaPredicted RBP22.7■■□□□ 1.22
SIPA1-210ENST00000534406 LINC00032P0C843 101 aa22.7■■□□□ 1.22
SIPA1-210ENST00000534406 NR1D1P20393 614 aa22.7■■□□□ 1.22
SIPA1-210ENST00000534406 PRPH2P23942 346 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms