RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	ZIC3	O60481	467 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	LRP3	O75074	770 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	CS	O75390	466 aa	Known RBP	4.27	□□□□□ -1.73
ATM-223	ENST00000533979	VPS26A	O75436	327 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	CSDE1	O75534	798 aa	Known RBP	4.27	□□□□□ -1.73
ATM-223	ENST00000533979	RPS6KA5	O75582	802 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	WDPCP	O95876	746 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	GAS8	O95995	478 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	NUDT17	P0C025	328 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	IQCF3	P0C7M6	154 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	SP9	P0CG40	484 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	STAG3L1	P0CL83	205 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	DLAT	P10515	647 aa	Known RBP	4.27	□□□□□ -1.73
ATM-223	ENST00000533979	CLU	P10909	449 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	MARCKS	P29966	332 aa	Predicted RBP	4.27	□□□□□ -1.73
ATM-223	ENST00000533979	STX2	P32856	288 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	SST	P61278	116 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	SULT2A1	Q06520	285 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	IL10RB	Q08334	325 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	ZMYND11	Q15326	602 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	AMZ1	Q400G9	498 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	KCTD21	Q4G0X4	260 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	LCE1E	Q5T753	118 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	CD164L2	Q6UWJ8	174 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979		Q75L30	129 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	TAS2R42	Q7RTR8	314 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	ADGRD2	Q7Z7M1	963 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	MISP	Q8IVT2	679 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	THAP8	Q8NA92	274 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	TRIM58	Q8NG06	486 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	MAGEC3	Q8TD91	643 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	PPP4R1	Q8TF05	950 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	FCGR1B	Q92637	280 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	HAS2	Q92819	552 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	CD101	Q93033	1021 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	COG3	Q96JB2	828 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	RPGRIP1	Q96KN7	1286 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	ZNF583	Q96ND8	569 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	CCT7	Q99832	543 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	CCDC77	Q9BR77	488 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	PRRG4	Q9BZD6	226 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	TRPV6	Q9H1D0	765 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	EVA1A	Q9H8M9	152 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	TCF7L2	Q9NQB0	619 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.27	□□□□□ -1.73
ATM-223	ENST00000533979	GLRX2	Q9NS18	164 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	HOXC10	Q9NYD6	342 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	AIPL1	Q9NZN9	384 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	B3GAT1	Q9P2W7	334 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	ATXN10	Q9UBB4	475 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	CHRNA9	Q9UGM1	479 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	SPATA31E1	Q6ZUB1	1445 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	PTPRU	Q92729	1446 aa		4.27	□□□□□ -1.73
ATM-223	ENST00000533979	PCDH11Y	Q9BZA8	1340 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	KIF1B	O60333	1816 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	IGHV4OR15-8	A0A075B7B6	117 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979		A0A0U1RQV5	110 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	TMEM89	A2RUT3	159 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	HNRNPCL2	B2RXH8	293 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979		K7EQM0	130 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	ERLIN1	O75477	346 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	SURF6	O75683	361 aa	Known RBP	4.26	□□□□□ -1.73
ATM-223	ENST00000533979	STBD1	O95210	358 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	LDLR	P01130	860 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	ASGR1	P07306	291 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	RALA	P11233	206 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	IRF2	P14316	349 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	RPA2	P15927	270 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	CALB2	P22676	271 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	ITGA3	P26006	1051 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	PTPN6	P29350	595 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	HLA-F	P30511	346 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	CCZ1B	P86790	482 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	CCZ1	P86791	482 aa	Predicted RBP	4.26	□□□□□ -1.73
ATM-223	ENST00000533979	TNFRSF17	Q02223	184 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	ARL16	Q0P5N6	197 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	CARTPT	Q16568	116 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	PDK4	Q16654	411 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	CA9	Q16790	459 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	C11orf63	Q6NUN7	778 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	C9orf139	Q6ZV77	190 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	GPR141	Q7Z602	305 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	TMPRSS12	Q86WS5	348 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	COMMD2	Q86X83	199 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	GRAMD2A	Q8IUY3	354 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	THEM5	Q8N1Q8	247 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	STKLD1	Q8NE28	680 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	OR6C4	Q8NGE1	309 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	OR52I2	Q8NH67	350 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	OR5R1	Q8NH85	324 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	ZNF671	Q8TAW3	534 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	U2AF1L4	Q8WU68	220 aa	Known RBP	4.26	□□□□□ -1.73
ATM-223	ENST00000533979	CASP10	Q92851	521 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.26	□□□□□ -1.73
ATM-223	ENST00000533979	AGAP3	Q96P47	875 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	TSSK2	Q96PF2	358 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	ZNF607	Q96SK3	696 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	PCYT2	Q99447	389 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	KXD1	Q9BQD3	176 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	NTMT1	Q9BV86	223 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms